SGN Marker C2_At5g09580

SGN-M8628
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
Capsicum annuumSingleSGN-U197054---
Solanum tuberosumSingleSGN-U266440---
ArabidopsisSingleAt5g09580 on TAIR---
Mapped locations  
Map: Eggplant-COSII   
Map version
63 (location: 42248)
Chromosome
1
Position
130.40 cM
Confidence
I(LOD2)
Protocol
CAPS


Eggplant-COSII

PCR data   Exp. ID 43815
Forward primer (5'-3')
TCAGTCCAAGTTCGCCGCACTTACG
Accessions and product sizes
Approximate temperature
55°C
Reverse primer (5'-3')
AGCCCGTCAATACACAAGTCTTCAAC
Digested band sizes (using unknown enzyme)
Mg+2 concentration
Unknown
   Enzymes
  

Map: Tomato-EXPEN 2000   
Map version
52 (location: 38767)
Chromosome
1
Position
140.50 cM
Confidence
F(LOD3)
Protocol
CAPS


Tomato-EXPEN 2000

PCR data   Exp. ID 41690
Forward primer (5'-3')
TCAGTCCAAGTTCGCCGCACTTACG
Accessions and product sizes
Solanum pennellii TA56
380
Solanum lycopersicum TA209
380
Approximate temperature
53°C
Reverse primer (5'-3')
AGCCCGTCAATACACAAGTCTTCAAC
Digested band sizes (using unknown enzyme)
Mg+2 concentration
1.5mM
   Enzymes
  

Map: Arabidopsis COSII   
Map version
44 (location: 27083)
Chromosome
5
Position
2.97 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At5g09580  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D8628 marker 8628
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