SGN Marker C2_At5g11550

SGN-M8653
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
Capsicum annuumSingleSGN-U201014---
Lycopersicon CombinedSingleSGN-U225801---
Solanum tuberosumSingleSGN-U247089---
ArabidopsisSingleAt5g11550 on TAIR---
Mapped locations  
Map: Pepper-COSII   
Map version
58 (location: 41512)
Chromosome
11
Position
108.20 cM
Confidence
I
Protocol
CAPS


Pepper-COSII

PCR data   Exp. ID 43488
Forward primer (5'-3')
ATTGCCCCTCCTGTTTTGTACAC
Accessions and product sizes
Approximate temperature
55°C
Reverse primer (5'-3')
CACCGGATTCGGAACAAGTGAATG
Digested band sizes (using unknown enzyme)
Mg+2 concentration
Unknown
   Enzymes
  

Map: Tomato-EXPEN 2000   
Map version
52 (location: 38777)
Chromosome
11
Position
89.10 cM
Confidence
I(LOD2)
Protocol
CAPS


Tomato-EXPEN 2000

PCR data   Exp. ID 41702
Forward primer (5'-3')
TCATCTTCATCTAACACTAATTCACAGAG
Accessions and product sizes
Approximate temperature
Unknown
Reverse primer (5'-3')
ATGTCCACCACTGCCCCGACAGC
Digested band sizes (using unknown enzyme)
Mg+2 concentration
1.5mM
   Enzymes
  

Map: Arabidopsis COSII   
Map version
44 (location: 27110)
Chromosome
5
Position
3.71 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At5g11550  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D8653 marker 8653
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