SGN Marker C2_At5g17660

SGN-M8738
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
CoffeeSingle304613 (SGN)
123409 (CGN)
---
Lycopersicon CombinedSingleSGN-U237247---
ArabidopsisSingleAt5g17660 on TAIR---
Mapped locations  
Map: Arabidopsis COSII   
Map version
44 (location: 27197)
Chromosome
5
Position
5.82 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII

PCR data   Exp. ID 41724
Forward primer (5'-3')
AGGTGTTTGAGGATGCAACATTGCC
Accessions and product sizes
Solanum pennellii TA56
1100
Solanum lycopersicum TA209
1100
Approximate temperature
55°C
Reverse primer (5'-3')
TCTCTTAGCAAGCCACATAAGAAATCT
Digested band sizes (using amplicon difference)
Solanum lycopersicum TA209
450
Solanum pennellii TA56
900
Mg+2 concentration
1.5mM
   Enzymes
  
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At5g17660  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D8738 marker 8738
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