SGN Marker C2_At5g18410

SGN-M8749
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
CoffeeSingle304540 (SGN)
121980 (CGN)
---
Lycopersicon CombinedSingleSGN-U219039---
ArabidopsisSingleAt5g18410 on TAIR---
Mapped locations  
Map: Arabidopsis COSII   
Map version
44 (location: 27208)
Chromosome
5
Position
6.10 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII

PCR data   Exp. ID 41729
Forward primer (5'-3')
AGGAGATAGCCCTATGGTCACTCT
Accessions and product sizes
Solanum lycopersicum TA209
1500
Solanum pennellii TA56
1100
Approximate temperature
60°C
Reverse primer (5'-3')
AACACACTTCCAGTATTAATATTGG
Digested band sizes (using amplicon difference)
Solanum pennellii TA56
625
Solanum lycopersicum TA209
900
Mg+2 concentration
1.5mM
   Enzymes
  
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At5g18410  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D8749 marker 8749
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