SGN Marker C2_At5g19130

SGN-M8760
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
CoffeeSingle307377 (SGN)
126680 (CGN)
---
Capsicum annuumSingleSGN-U203628---
Lycopersicon CombinedSingleSGN-U237784---
Solanum tuberosumSingleSGN-U247255---
ArabidopsisSingleAt5g19130 on TAIR---
Mapped locations  
Map: Pepper-COSII   
Map version
58 (location: 41520)
Chromosome
2
Position
29.60 cM
Confidence
F(LOD3)
Protocol
CAPS


Pepper-COSII

PCR data   Exp. ID 43496
Forward primer (5'-3')
TGCTGCAGCTGGTGTTTTTGCTC
Accessions and product sizes
Approximate temperature
63°C
Reverse primer (5'-3')
ATTCGACAGCATGGGACTAGCAGAAC
Digested band sizes (using unknown enzyme)
Mg+2 concentration
Unknown
   Enzymes
  

Map: Tomato-EXPEN 2000   
Map version
52 (location: 38804)
Chromosome
2
Position
22.50 cM
Confidence
I
Protocol
CAPS


Tomato-EXPEN 2000

PCR data   Exp. ID 41733
Forward primer (5'-3')
TGCTGCAGCTGGTGTTTTTGCTC
Accessions and product sizes
Approximate temperature
Unknown
Reverse primer (5'-3')
ATTCGACAGCATGGGACTAGCAGAAC
Digested band sizes (using unknown enzyme)
Mg+2 concentration
1.5mM
   Enzymes
  

Map: Arabidopsis COSII   
Map version
44 (location: 27219)
Chromosome
5
Position
6.42 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At5g19130  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D8760 marker 8760
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