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SGN Marker C2_At5g24170

SGN-M8830
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
CoffeeSingle300688 (SGN)
122869 (CGN)
---
Lycopersicon CombinedSingleSGN-U224724---
ArabidopsisSingleAt5g24170 on TAIR---
Mapped locations  
Map: Tomato-EXPEN 2000   
Map version
52 (location: 38824)
Chromosome
3
Position
129.30 cM
Confidence
I(LOD2)
Protocol
CAPS


Tomato-EXPEN 2000

PCR data   Exp. ID 41763
Forward primer (5'-3')
ATTTTGGGGGAGAATGAAGAGCAGC
Accessions and product sizes
Approximate temperature
Unknown
Reverse primer (5'-3')
AATAACAAGGCAAATTTGATGGGC
Digested band sizes (using unknown enzyme)
Mg+2 concentration
1.5mM
   Enzymes
  

Map: Arabidopsis COSII   
Map version
44 (location: 27291)
Chromosome
5
Position
8.19 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII
Universal primers for Asterid species 
No additional PCR data found.
Other COSII sequence data 

Alignment of Arabidopsis CDS and edited Asterid unigenes, FASTA
Alignment of DNA and translated peptides from Arabidopsis CDS and edited Asterid unigenes, plain text
Alignment of translated peptides from Arabidopsis CDS and edited Asterid unigenes, ClustalW
Alignment of translated peptides from Arabidopsis CDS and edited Asterid unigenes, FASTA

Genomic location of C2_At5g24170  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D8830 marker 8830
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