SGN Marker C2_At5g38660

SGN-M8897
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
CoffeeSingle307961 (SGN)
128329 (CGN)
---
Capsicum annuumSingleSGN-U200210---
ArabidopsisSingleAt5g38660 on TAIR---
Mapped locations  
Map: Arabidopsis COSII   
Map version
44 (location: 27362)
Chromosome
5
Position
15.49 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII

PCR data   Exp. ID 41792
Forward primer (5'-3')
AGGATATTGTTCCTGATGATGAGTTTTC
Accessions and product sizes
Solanum pennellii TA56
200
Solanum lycopersicum TA209
200
Approximate temperature
55°C
Reverse primer (5'-3')
ATGTTAACATAATTGCAGACCACTCAGA
Digested band sizes (using amplicon difference)
Solanum lycopersicum TA209
150
Solanum pennellii TA56
200
Mg+2 concentration
1.5mM
   Enzymes
  
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At5g38660  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D8897 marker 8897
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