SGN Marker C2_At5g45420

SGN-M8964
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
Capsicum annuumSingleSGN-U199891---
Solanum tuberosumSingleSGN-U248677---
ArabidopsisSingleAt5g45420 on TAIR---
Mapped locations  
Map: Arabidopsis COSII   
Map version
44 (location: 27431)
Chromosome
5
Position
18.42 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII

PCR data   Exp. ID 41815
Forward primer (5'-3')
AGGACAGGAAAACAGTTGATAAGAGA
Accessions and product sizes
Solanum lycopersicum TA209
800
Solanum pennellii TA56
800
Approximate temperature
55°C
Reverse primer (5'-3')
TTCCCCATCATCTTCCTCAACAACTC
Digested band sizes (using amplicon difference)
Solanum pennellii TA56
650
Solanum lycopersicum TA209
500
Mg+2 concentration
1.5mM
   Enzymes
  
Universal primers for Asterid species 
No additional PCR data found.
Related Markers  

Related Genotyped Markers: These markers have been genotyped and share a name with this marker
Genomic location of C2_At5g45420  
 %2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D8964 marker 8964
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