SGN Marker C2_At5g45760

SGN-M8968
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
CoffeeSingle311687 (SGN)
126076 (CGN)
---
Lycopersicon CombinedMultipleSGN-U235193---
Solanum tuberosumSingleSGN-U257465---
ArabidopsisSingleAt5g45760 on TAIR---
Mapped locations  
Map: Eggplant-COSII   
Map version
63 (location: 42257)
Chromosome
2
Position
24.20 cM
Confidence
F(LOD3)
Protocol
CAPS


Eggplant-COSII

PCR data   Exp. ID 43826
Forward primer (5'-3')
TGCACAGTTACAATTACAACAAGGATG
Accessions and product sizes
Approximate temperature
55°C
Reverse primer (5'-3')
ACATGCGATTTTGGCGGATGTCAAT
Digested band sizes (using unknown enzyme)
Mg+2 concentration
Unknown
   Enzymes
  

Map: Tomato-EXPEN 2000   
Map version
52 (location: 38869)
Chromosome
2
Position
48.50 cM
Confidence
I
Protocol
CAPS


Tomato-EXPEN 2000

PCR data   Exp. ID 41818
Forward primer (5'-3')
TGCACAGTTACAATTACAACAAGGATG
Accessions and product sizes
Approximate temperature
Unknown
Reverse primer (5'-3')
ACATGCGATTTTGGCGGATGTCAAT
Digested band sizes (using unknown enzyme)
Mg+2 concentration
1.5mM
   Enzymes
  

Map: Arabidopsis COSII   
Map version
44 (location: 27435)
Chromosome
5
Position
18.58 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At5g45760  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D8968 marker 8968
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)