SGN Marker C2_At5g45950

SGN-M8969
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
Capsicum annuumSingleSGN-U202650---
Lycopersicon CombinedSingleSGN-U216510---
Solanum tuberosumSingleSGN-U251578---
ArabidopsisSingleAt5g45950 on TAIR---
Mapped locations  
Map: Tobacco N. tomentosiformis   
Map version
91 (location: 46771)
Chromosome
2
Position
5.40 cM
Confidence
I(LOD2)
Protocol
CAPS


Tobacco N. tomentosiformis

Map: Tobacco N. acuminata   
Map version
89 (location: 46536)
Chromosome
2
Position
28.90 cM
Confidence
F(LOD3)
Protocol
CAPS


Tobacco N. acuminata

Map: Tomato-EXPEN 2000   
Map version
52 (location: 38870)
Chromosome
2
Position
56.50 cM
Confidence
F(LOD3)
Protocol
CAPS


Tomato-EXPEN 2000

PCR data   Exp. ID 39973
Forward primer (5'-3')
TGAGATTCAAGTGTAGATCCTGGAAA
Accessions and product sizes
Approximate temperature
Unknown
Reverse primer (5'-3')
TGTGGGTCTAGAAACGCTCTGGTCAT
Digested band sizes (using unknown enzyme)
Mg+2 concentration
1.5mM
   Enzymes
  

Map: Arabidopsis COSII   
Map version
44 (location: 27436)
Chromosome
5
Position
18.65 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII
Universal primers for Asterid species 
No additional PCR data found.
Related Markers  

Related Genotyped Markers: These markers have been genotyped and share a name with this marker
Genomic location of C2_At5g45950  
 %2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D8969 marker 8969
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