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Potato locus MYB-CC type transfactor
| Locus details | Download GMOD XML | Note to Editors | Annotation guidelines |
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Links to external databases
Links to external databases
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| Registry name: | None | [Associate registry name] |
Notes and figures (0)
Notes and figures (0)
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| Image | Description | Type |
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Accessions and images (0)
Accessions and images (0)
| [Associate accession] |
Accession name:
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| Alleles (0) | None | [Add new Allele] |
Associated loci (0)
Associated loci (0)
| [Associate new locus] |
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| Associated loci - graphical view | None |
SolCyc links
SolCyc links
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Sequence annotations
Sequence annotations
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Genome features
Genome features
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Genomic sequence
Genomic sequence
| unprocessed genomic sequence region underlying this gene |
>PGSC0003DMG400011435 PGSC_DMv3_219_ch10:43816675..43820101
GTTCATTCCTTATCTACGTTACAGAATATTTAAAATATAGTCGGCATTTGGCACTTACATGTTGACATATTCATATTCTTTATATTATGTGTATGGAGTCATTTAGCATATAACAAAAAGAAGAAGAAGAAATTAGGAGCAAAGATTCAATTTTTATTTTTCAAGAATCTTCATCCTTTTAGTTTCTTGATTTTTCGCGCTTTTTAATTAAGACATTCATTCAAGAAATGCAGTTTGTTTGTTGAAAATATTAAAACAGAATCACCCTTGTTTGTGTATTTTGATAGAAGTTGCTATTTTCTTGATCTTGATCTTGACTAGTCGTTTTGGCGAAAAAATGAGTATTCAGAACTATGAATTAGCAAGTGATTGCAACTTAGAGTTCCCACAGATGGGATTTTGTTTCCAGCCTGAAAACTCTGCAGAAAATGGTTGTCAACAGCAGCAGCAACAGAATTTTTGGCCTAGTACTGATTCATCATCATCGAGAACGATTATAAGTCGAATAGGATCATCACCTTCTGCTTTTTTTGCTACAGAGAGGTACCTTGGATTAACACAATATGAAAACCAAGACAACAATAATAGTTGTTCTCAACTATCCAAGAATCTTGGTCCTCAAACTACGTCGTTTACTCAGCAATGTGGAAATGGATTCTTGGCAGATTCATCAGCACGAGTTGACACCGATTTTCCTAAGATTTCAATGCCATCATTCATCAGATCACAGTTTTCAAGTAGTCAACCATTTGGTCCTGAAGGACTCTATGGAAATCCCTTTAGTAATCTATCAGAGAAAGAGAGGATTTTGCTTCTTAAGAGCAAGTTGTTTAGAGAAATTGACTCTTCAAATAGGCAGCCTGCTTCAATCCCTTTTCAAGGAAATCAAGACTATGGTGTAAGTACTTGATTCTTGTTTACATAATACAGTCAAATCTCTCTGTAACGATTTTGTTTCTCCTGATATGTTTTGGTTGCTATAGCTAGATGTTGTTATCGAGAACATCTAATATAACGTAATATGAAAGTTTGTTCCAAAGAAAACTTGGCTGGTATAGAGAGGTCTGACTGAAGTATAGTTTTTCAAGTATTTGAATTTAAGTACTTTCAATTGCTTGTTGTCTACATAATACAGTCAAACCTCTCTATAACAGTGTTGTTTGTCCTGATATGTTTTAGTTGCTATAGCGAGATGTTATTGAAAACCATCTAATATTACGTAATATGAAAGTCTGTTCCAAAGAAAACTTGGCCGTTATAGAGAGGCCTGACTGTAGTATTGTTTTTCAAGTTTTTATTCTGACTCGAGTTATGTTCCAACAGGTCTCAAATAATACATGTGGTTTTAACTTGGTACATATAAGGCAACAATCTGGAAGTCAATCAGCAAATAGTTTTAACAACTCTGGATGTTCTGGAGGATCTTTATCGAGTAAGGCACGAATCAGGTGGACTCAGGATCTTCATGATCGATTTGTTGAGTGTGTAAATCGTCTTGGAGGAGCTGACAGTAAGTAAATTTACACATTTTTTTAGCTTTTGTTTCTTTGGAGGTGATCATTTTGGCTATGGATTAATTGTTCTTCACTTCATTTGCCAGAGGCGACGCCAAAGGCAATACTAAAGCTGATGGATTCAGAAGGATTAACAATTTTTCATGTAAAAAGTCATTTACAGGTACTTGTTAATATGAAAGAAATACTTTCTTGGAACACTTTTTGTATTTAGACAAAATTCTGAATCAAATGTTTTTTCCTTCTTGTTTTGACTAGAAATATCGAAATGCAAAGTTCATCCCTGAATCGACAGAAGGTATGTATTATCCGAAATAAGCTTCATGTTTATTATGTAAGAGATATTCATCCCACAGCTTGAACCCGTGACTTGTAGTTCATACAGAGACAATTTTATCGTTTCTCCAAGGCTCTCTTCATTACTCAAGCATCAGTACAGATGTATGCTGCTTGTTTTATGCTTTTTTGTGTTAATTTCTGAGCAAAAAAAAATCAAATATGTTTCTCCAAATACAAGATCCTTAACCACATATAAGTATCCTCGTCTTGATAAACAGTTAATACACCTTATTTCCAAACAAGTTGGAGTCCGTTATATGAATCCTCACGAACCATGTTCTAAACCTTCTTCGAAAAATCTTCTCTGCTTTCATTTTTTATCATTTACGCAACAGGTAGATCCAACATGATGAAAAACACAAGAAGAGACTATTTCCTTAAACAAATATGCTATTAGTAAATCTGTTGAAGTCTTTGAAATCTCAGAAGATTGAAAGAACATTTTCATCTTACTTCTTATACAAATCACTTTAATTTTATTTCGTATGATGATGATATGAAATGAGCTTTAAATGAAGGAGTGGGGGATTCGTATAGCGGACCCCAACTTGTTTGAGACTGAGGCGTAGTTGTTGTTTAAATTTGATATTTACAGCAAACTAAAAACTTAATTTTAACTCTGCTTGTGGAAAAATGCTCTCTGAGATATACTCAAATCTGTCATTACATGCTAAGTACTTAATCTTAAAGTTTCCATCTCTTTCTGGAAATGAGAGTTCCCTCCTTCCTATGATGCAGGGAGATCTGGAAAAACAGACAGCCCGAATAATGTGTCACAGATCGACAGCAAAACGTATGTTCTTTGCAACTATCTTGACAAATTTTCGTGACTATTTTAGCTGGAAAGTTACCTTAATACAGATTTCTTTTCAGTGGAATGCAAATCAAAGAAGCATTGCATATGCAGCTAGAAGTCCAGAGGCGTCTTCACGAGCAACTAGAGGTACATTTAGTACATGAAAAGATATAAATTTAAACACTTGTAGGCATGCTTAGAGCTGAAACAGTATCAAGGCAATCTTTCTAAATCTTATTGTCTTTCTGTTGTTAGATTCAGCGGAAGTTACAATTGAGGATCGAAGAACAAGGGGAGCAGTTGAAGAAGATATTTGAACAACAACAACAAACAACTAGGAGTCTCTTGGAGACACGAAATTCAAGCATTTCGTCTCCTGCTGATCAGTTCACCCCGCACGAAGATGAAGTTTTTGCTGCAGAAAGCTTCAATAATACTCATTTCCAATCTAATATAAGTTACAATGACATGTAAACAACATTAGTTTTACATTTTTTCAGCTAGTTTTTGAAAGAGAGTCGACGTTAGCATTTCTGTAAAGATAATTTTGCCTCCCAAGCAAACTACACAAAAAAAAAATGTATATTACAAAGTGAAGACATAAATATCATGCAAAAACTTAAAGTACTTCATTCATGCTATATGTTCAATGGTGCTCTGGTGTGCATAAGGAGAAATTTGACTAATGATAGTTATTTAATAAGGTGATCTTGTAAGTTGTAATATGCTTGTATACACTAAATTTTGTCTTTGCTTCTCTGTAGTTTGCCCTCAAGTG
GTTCATTCCTTATCTACGTTACAGAATATTTAAAATATAGTCGGCATTTGGCACTTACATGTTGACATATTCATATTCTTTATATTATGTGTATGGAGTCATTTAGCATATAACAAAAAGAAGAAGAAGAAATTAGGAGCAAAGATTCAATTTTTATTTTTCAAGAATCTTCATCCTTTTAGTTTCTTGATTTTTCGCGCTTTTTAATTAAGACATTCATTCAAGAAATGCAGTTTGTTTGTTGAAAATATTAAAACAGAATCACCCTTGTTTGTGTATTTTGATAGAAGTTGCTATTTTCTTGATCTTGATCTTGACTAGTCGTTTTGGCGAAAAAATGAGTATTCAGAACTATGAATTAGCAAGTGATTGCAACTTAGAGTTCCCACAGATGGGATTTTGTTTCCAGCCTGAAAACTCTGCAGAAAATGGTTGTCAACAGCAGCAGCAACAGAATTTTTGGCCTAGTACTGATTCATCATCATCGAGAACGATTATAAGTCGAATAGGATCATCACCTTCTGCTTTTTTTGCTACAGAGAGGTACCTTGGATTAACACAATATGAAAACCAAGACAACAATAATAGTTGTTCTCAACTATCCAAGAATCTTGGTCCTCAAACTACGTCGTTTACTCAGCAATGTGGAAATGGATTCTTGGCAGATTCATCAGCACGAGTTGACACCGATTTTCCTAAGATTTCAATGCCATCATTCATCAGATCACAGTTTTCAAGTAGTCAACCATTTGGTCCTGAAGGACTCTATGGAAATCCCTTTAGTAATCTATCAGAGAAAGAGAGGATTTTGCTTCTTAAGAGCAAGTTGTTTAGAGAAATTGACTCTTCAAATAGGCAGCCTGCTTCAATCCCTTTTCAAGGAAATCAAGACTATGGTGTAAGTACTTGATTCTTGTTTACATAATACAGTCAAATCTCTCTGTAACGATTTTGTTTCTCCTGATATGTTTTGGTTGCTATAGCTAGATGTTGTTATCGAGAACATCTAATATAACGTAATATGAAAGTTTGTTCCAAAGAAAACTTGGCTGGTATAGAGAGGTCTGACTGAAGTATAGTTTTTCAAGTATTTGAATTTAAGTACTTTCAATTGCTTGTTGTCTACATAATACAGTCAAACCTCTCTATAACAGTGTTGTTTGTCCTGATATGTTTTAGTTGCTATAGCGAGATGTTATTGAAAACCATCTAATATTACGTAATATGAAAGTCTGTTCCAAAGAAAACTTGGCCGTTATAGAGAGGCCTGACTGTAGTATTGTTTTTCAAGTTTTTATTCTGACTCGAGTTATGTTCCAACAGGTCTCAAATAATACATGTGGTTTTAACTTGGTACATATAAGGCAACAATCTGGAAGTCAATCAGCAAATAGTTTTAACAACTCTGGATGTTCTGGAGGATCTTTATCGAGTAAGGCACGAATCAGGTGGACTCAGGATCTTCATGATCGATTTGTTGAGTGTGTAAATCGTCTTGGAGGAGCTGACAGTAAGTAAATTTACACATTTTTTTAGCTTTTGTTTCTTTGGAGGTGATCATTTTGGCTATGGATTAATTGTTCTTCACTTCATTTGCCAGAGGCGACGCCAAAGGCAATACTAAAGCTGATGGATTCAGAAGGATTAACAATTTTTCATGTAAAAAGTCATTTACAGGTACTTGTTAATATGAAAGAAATACTTTCTTGGAACACTTTTTGTATTTAGACAAAATTCTGAATCAAATGTTTTTTCCTTCTTGTTTTGACTAGAAATATCGAAATGCAAAGTTCATCCCTGAATCGACAGAAGGTATGTATTATCCGAAATAAGCTTCATGTTTATTATGTAAGAGATATTCATCCCACAGCTTGAACCCGTGACTTGTAGTTCATACAGAGACAATTTTATCGTTTCTCCAAGGCTCTCTTCATTACTCAAGCATCAGTACAGATGTATGCTGCTTGTTTTATGCTTTTTTGTGTTAATTTCTGAGCAAAAAAAAATCAAATATGTTTCTCCAAATACAAGATCCTTAACCACATATAAGTATCCTCGTCTTGATAAACAGTTAATACACCTTATTTCCAAACAAGTTGGAGTCCGTTATATGAATCCTCACGAACCATGTTCTAAACCTTCTTCGAAAAATCTTCTCTGCTTTCATTTTTTATCATTTACGCAACAGGTAGATCCAACATGATGAAAAACACAAGAAGAGACTATTTCCTTAAACAAATATGCTATTAGTAAATCTGTTGAAGTCTTTGAAATCTCAGAAGATTGAAAGAACATTTTCATCTTACTTCTTATACAAATCACTTTAATTTTATTTCGTATGATGATGATATGAAATGAGCTTTAAATGAAGGAGTGGGGGATTCGTATAGCGGACCCCAACTTGTTTGAGACTGAGGCGTAGTTGTTGTTTAAATTTGATATTTACAGCAAACTAAAAACTTAATTTTAACTCTGCTTGTGGAAAAATGCTCTCTGAGATATACTCAAATCTGTCATTACATGCTAAGTACTTAATCTTAAAGTTTCCATCTCTTTCTGGAAATGAGAGTTCCCTCCTTCCTATGATGCAGGGAGATCTGGAAAAACAGACAGCCCGAATAATGTGTCACAGATCGACAGCAAAACGTATGTTCTTTGCAACTATCTTGACAAATTTTCGTGACTATTTTAGCTGGAAAGTTACCTTAATACAGATTTCTTTTCAGTGGAATGCAAATCAAAGAAGCATTGCATATGCAGCTAGAAGTCCAGAGGCGTCTTCACGAGCAACTAGAGGTACATTTAGTACATGAAAAGATATAAATTTAAACACTTGTAGGCATGCTTAGAGCTGAAACAGTATCAAGGCAATCTTTCTAAATCTTATTGTCTTTCTGTTGTTAGATTCAGCGGAAGTTACAATTGAGGATCGAAGAACAAGGGGAGCAGTTGAAGAAGATATTTGAACAACAACAACAAACAACTAGGAGTCTCTTGGAGACACGAAATTCAAGCATTTCGTCTCCTGCTGATCAGTTCACCCCGCACGAAGATGAAGTTTTTGCTGCAGAAAGCTTCAATAATACTCATTTCCAATCTAATATAAGTTACAATGACATGTAAACAACATTAGTTTTACATTTTTTCAGCTAGTTTTTGAAAGAGAGTCGACGTTAGCATTTCTGTAAAGATAATTTTGCCTCCCAAGCAAACTACACAAAAAAAAAATGTATATTACAAAGTGAAGACATAAATATCATGCAAAAACTTAAAGTACTTCATTCATGCTATATGTTCAATGGTGCTCTGGTGTGCATAAGGAGAAATTTGACTAATGATAGTTATTTAATAAGGTGATCTTGTAAGTTGTAATATGCTTGTATACACTAAATTTTGTCTTTGCTTCTCTGTAGTTTGCCCTCAAGTG
| Download sequence region |
Get flanking sequences on PGSC_DMv3_219_ch10
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mRNA PGSC0003DMT400029756
mRNA PGSC0003DMT400029756
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| Ontology terms | None | terms associated with this mRNA |
cDNA sequence
cDNA sequence
| spliced cDNA sequence, including UTRs |
>PGSC0003DMT400029756 Transcription factor
GTTCATTCCTTATCTACGTTACAGAATATTTAAAATATAGTCGGCATTTGGCACTTACATGTTGACATATTCATATTCTTTATATTATGTGTATGGAGTCATTTAGCATATAACAAAAAGAAGAAGAAGAAATTAGGAGCAAAGATTCAATTTTTATTTTTCAAGAATCTTCATCCTTTTAGTTTCTTGATTTTTCGCGCTTTTTAATTAAGACATTCATTCAAGAAATGCAGTTTGTTTGTTGAAAATATTAAAACAGAATCACCCTTGTTTGTGTATTTTGATAGAAGTTGCTATTTTCTTGATCTTGATCTTGACTAGTCGTTTTGGCGAAAAAATGAGTATTCAGAACTATGAATTAGCAAGTGATTGCAACTTAGAGTTCCCACAGATGGGATTTTGTTTCCAGCCTGAAAACTCTGCAGAAAATGGTTGTCAACAGCAGCAGCAACAGAATTTTTGGCCTAGTACTGATTCATCATCATCGAGAACGATTATAAGTCGAATAGGATCATCACCTTCTGCTTTTTTTGCTACAGAGAGGTACCTTGGATTAACACAATATGAAAACCAAGACAACAATAATAGTTGTTCTCAACTATCCAAGAATCTTGGTCCTCAAACTACGTCGTTTACTCAGCAATGTGGAAATGGATTCTTGGCAGATTCATCAGCACGAGTTGACACCGATTTTCCTAAGATTTCAATGCCATCATTCATCAGATCACAGTTTTCAAGTAGTCAACCATTTGGTCCTGAAGGACTCTATGGAAATCCCTTTAGTAATCTATCAGAGAAAGAGAGGATTTTGCTTCTTAAGAGCAAGTTGTTTAGAGAAATTGACTCTTCAAATAGGCAGCCTGCTTCAATCCCTTTTCAAGGAAATCAAGACTATGGTGTCTCAAATAATACATGTGGTTTTAACTTGGTACATATAAGGCAACAATCTGGAAGTCAATCAGCAAATAGTTTTAACAACTCTGGATGTTCTGGAGGATCTTTATCGAGTAAGGCACGAATCAGGTGGACTCAGGATCTTCATGATCGATTTGTTGAGTGTGTAAATCGTCTTGGAGGAGCTGACAAGGCGACGCCAAAGGCAATACTAAAGCTGATGGATTCAGAAGGATTAACAATTTTTCATGTAAAAAGTCATTTACAGAAATATCGAAATGCAAAGTTCATCCCTGAATCGACAGAAGGGAGATCTGGAAAAACAGACAGCCCGAATAATGTGTCACAGATCGACAGCAAAACGTATGTTCTTTGCAACTATCTTGACAAATTTTCGTGACTATTTTAGCTGGAAAGTTACCTTAATACAGATTTCTTTTCAGTGGAATGCAAATCAAAGAAGCATTGCATATGCAGCTAGAAGTCCAGAGGCGTCTTCACGAGCAACTAGAGATTCAGCGGAAGTTACAATTGAGGATCGAAGAACAAGGGGAGCAGTTGAAGAAGATATTTGAACAACAACAACAAACAACTAGGAGTCTCTTGGAGACACGAAATTCAAGCATTTCGTCTCCTGCTGATCAGTTCACCCCGCACGAAGATGAAGTTTTTGCTGCAGAAAGCTTCAATAATACTCATTTCCAATCTAATATAAGTTACAATGACATGTAAACAACATTAGTTTTACATTTTTTCAGCTAGTTTTTGAAAGAGAGTCGACGTTAGCATTTCTGTAAAGATAATTTTGCCTCCCAAGCAAACTACACAAAAAAAAAATGTATATTACAAAGTGAAGACATAAATATCATGCAAAAACTTAAAGTACTTCATTCATGCTATATGTTCAATGGTGCTCTGGTGTGCATAAGGAGAAATTTGACTAATGATAGTTATTTAATAAGGTGATCTTGTAAGTTGTAATATGCTTGTATACACTAAATTTTGTCTTTGCTTCTCTGTAGTTTGCCCTCAAGTG
GTTCATTCCTTATCTACGTTACAGAATATTTAAAATATAGTCGGCATTTGGCACTTACATGTTGACATATTCATATTCTTTATATTATGTGTATGGAGTCATTTAGCATATAACAAAAAGAAGAAGAAGAAATTAGGAGCAAAGATTCAATTTTTATTTTTCAAGAATCTTCATCCTTTTAGTTTCTTGATTTTTCGCGCTTTTTAATTAAGACATTCATTCAAGAAATGCAGTTTGTTTGTTGAAAATATTAAAACAGAATCACCCTTGTTTGTGTATTTTGATAGAAGTTGCTATTTTCTTGATCTTGATCTTGACTAGTCGTTTTGGCGAAAAAATGAGTATTCAGAACTATGAATTAGCAAGTGATTGCAACTTAGAGTTCCCACAGATGGGATTTTGTTTCCAGCCTGAAAACTCTGCAGAAAATGGTTGTCAACAGCAGCAGCAACAGAATTTTTGGCCTAGTACTGATTCATCATCATCGAGAACGATTATAAGTCGAATAGGATCATCACCTTCTGCTTTTTTTGCTACAGAGAGGTACCTTGGATTAACACAATATGAAAACCAAGACAACAATAATAGTTGTTCTCAACTATCCAAGAATCTTGGTCCTCAAACTACGTCGTTTACTCAGCAATGTGGAAATGGATTCTTGGCAGATTCATCAGCACGAGTTGACACCGATTTTCCTAAGATTTCAATGCCATCATTCATCAGATCACAGTTTTCAAGTAGTCAACCATTTGGTCCTGAAGGACTCTATGGAAATCCCTTTAGTAATCTATCAGAGAAAGAGAGGATTTTGCTTCTTAAGAGCAAGTTGTTTAGAGAAATTGACTCTTCAAATAGGCAGCCTGCTTCAATCCCTTTTCAAGGAAATCAAGACTATGGTGTCTCAAATAATACATGTGGTTTTAACTTGGTACATATAAGGCAACAATCTGGAAGTCAATCAGCAAATAGTTTTAACAACTCTGGATGTTCTGGAGGATCTTTATCGAGTAAGGCACGAATCAGGTGGACTCAGGATCTTCATGATCGATTTGTTGAGTGTGTAAATCGTCTTGGAGGAGCTGACAAGGCGACGCCAAAGGCAATACTAAAGCTGATGGATTCAGAAGGATTAACAATTTTTCATGTAAAAAGTCATTTACAGAAATATCGAAATGCAAAGTTCATCCCTGAATCGACAGAAGGGAGATCTGGAAAAACAGACAGCCCGAATAATGTGTCACAGATCGACAGCAAAACGTATGTTCTTTGCAACTATCTTGACAAATTTTCGTGACTATTTTAGCTGGAAAGTTACCTTAATACAGATTTCTTTTCAGTGGAATGCAAATCAAAGAAGCATTGCATATGCAGCTAGAAGTCCAGAGGCGTCTTCACGAGCAACTAGAGATTCAGCGGAAGTTACAATTGAGGATCGAAGAACAAGGGGAGCAGTTGAAGAAGATATTTGAACAACAACAACAAACAACTAGGAGTCTCTTGGAGACACGAAATTCAAGCATTTCGTCTCCTGCTGATCAGTTCACCCCGCACGAAGATGAAGTTTTTGCTGCAGAAAGCTTCAATAATACTCATTTCCAATCTAATATAAGTTACAATGACATGTAAACAACATTAGTTTTACATTTTTTCAGCTAGTTTTTGAAAGAGAGTCGACGTTAGCATTTCTGTAAAGATAATTTTGCCTCCCAAGCAAACTACACAAAAAAAAAATGTATATTACAAAGTGAAGACATAAATATCATGCAAAAACTTAAAGTACTTCATTCATGCTATATGTTCAATGGTGCTCTGGTGTGCATAAGGAGAAATTTGACTAATGATAGTTATTTAATAAGGTGATCTTGTAAGTTGTAATATGCTTGTATACACTAAATTTTGTCTTTGCTTCTCTGTAGTTTGCCCTCAAGTG
Protein sequence
Protein sequence
| translated polypeptide sequence |
>PGSC0003DMT400029756 Transcription factor
MSIQNYELASDCNLEFPQMGFCFQPENSAENGCQQQQQQNFWPSTDSSSSRTIISRIGSSPSAFFATERYLGLTQYENQDNNNSCSQLSKNLGPQTTSFTQQCGNGFLADSSARVDTDFPKISMPSFIRSQFSSSQPFGPEGLYGNPFSNLSEKERILLLKSKLFREIDSSNRQPASIPFQGNQDYGVSNNTCGFNLVHIRQQSGSQSANSFNNSGCSGGSLSSKARIRWTQDLHDRFVECVNRLGGADKATPKAILKLMDSEGLTIFHVKSHLQKYRNAKFIPESTEGRSGKTDSPNNVSQIDSKTYVLCNYLDKFS*
MSIQNYELASDCNLEFPQMGFCFQPENSAENGCQQQQQQNFWPSTDSSSSRTIISRIGSSPSAFFATERYLGLTQYENQDNNNSCSQLSKNLGPQTTSFTQQCGNGFLADSSARVDTDFPKISMPSFIRSQFSSSQPFGPEGLYGNPFSNLSEKERILLLKSKLFREIDSSNRQPASIPFQGNQDYGVSNNTCGFNLVHIRQQSGSQSANSFNNSGCSGGSLSSKARIRWTQDLHDRFVECVNRLGGADKATPKAILKLMDSEGLTIFHVKSHLQKYRNAKFIPESTEGRSGKTDSPNNVSQIDSKTYVLCNYLDKFS*
mRNA PGSC0003DMT400029758
mRNA PGSC0003DMT400029758
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| Ontology terms | None | terms associated with this mRNA |
cDNA sequence
cDNA sequence
| spliced cDNA sequence, including UTRs |
>PGSC0003DMT400029758 Transcription factor
GTTCATTCCTTATCTACGTTACAGAATATTTAAAATATAGTCGGCATTTGGCACTTACATGTTGACATATTCATATTCTTTATATTATGTGTATGGAGTCATTTAGCATATAACAAAAAGAAGAAGAAGAAATTAGGAGCAAAGATTCAATTTTTATTTTTCAAGAATCTTCATCCTTTTAGTTTCTTGATTTTTCGCGCTTTTTAATTAAGACATTCATTCAAGAAATGCAGTTTGTTTGTTGAAAATATTAAAACAGAATCACCCTTGTTTGTGTATTTTGATAGAAGTTGCTATTTTCTTGATCTTGATCTTGACTAGTCGTTTTGGCGAAAAAATGAGTATTCAGAACTATGAATTAGCAAGTGATTGCAACTTAGAGTTCCCACAGATGGGATTTTGTTTCCAGCCTGAAAACTCTGCAGAAAATGGTTGTCAACAGCAGCAGCAACAGAATTTTTGGCCTAGTACTGATTCATCATCATCGAGAACGATTATAAGTCGAATAGGATCATCACCTTCTGCTTTTTTTGCTACAGAGAGGTACCTTGGATTAACACAATATGAAAACCAAGACAACAATAATAGTTGTTCTCAACTATCCAAGAATCTTGGTCCTCAAACTACGTCGTTTACTCAGCAATGTGGAAATGGATTCTTGGCAGATTCATCAGCACGAGTTGACACCGATTTTCCTAAGATTTCAATGCCATCATTCATCAGATCACAGTTTTCAAGTAGTCAACCATTTGGTCCTGAAGGACTCTATGGAAATCCCTTTAGTAATCTATCAGAGAAAGAGAGGATTTTGCTTCTTAAGAGCAAGTTGTTTAGAGAAATTGACTCTTCAAATAGGCAGCCTGCTTCAATCCCTTTTCAAGGAAATCAAGACTATGGTGTCTCAAATAATACATGTGGTTTTAACTTGGTACATATAAGGCAACAATCTGGAAGTCAATCAGCAAATAGTTTTAACAACTCTGGATGTTCTGGAGGATCTTTATCGAGTAAGGCACGAATCAGGTGGACTCAGGATCTTCATGATCGATTTGTTGAGTGTGTAAATCGTCTTGGAGGAGCTGACAAGGCGACGCCAAAGGCAATACTAAAGCTGATGGATTCAGAAGGATTAACAATTTTTCATGTAAAAAGTCATTTACAGAAATATCGAAATGCAAAGTTCATCCCTGAATCGACAGAAGGGAGATCTGGAAAAACAGACAGCCCGAATAATGTGTCACAGATCGACAGCAAAACTGGAATGCAAATCAAAGAAGCATTGCATATGCAGCTAGAAGTCCAGAGGCGTCTTCACGAGCAACTAGAGATTCAGCGGAAGTTACAATTGAGGATCGAAGAACAAGGGGAGCAGTTGAAGAAGATATTTGAACAACAACAACAAACAACTAGGAGTCTCTTGGAGACACGAAATTCAAGCATTTCGTCTCCTGCTGATCAGTTCACCCCGCACGAAGATGAAGTTTTTGCTGCAGAAAGCTTCAATAATACTCATTTCCAATCTAATATAAGTTACAATGACATGTAAACAACATTAGTTTTACATTTTTTCAGCTAGTTTTTGAAAGAGAGTCGACGTTAGCATTTCTGTAAAGATAATTTTGCCTCCCAAGCAAACTACACAAAAAAAAAATGTATATTACAAAGTGAAGACATAAATATCATGCAAAAACTTAAAGTACTTCATTCATGCTATATGTTCAATGGTGCTCTGGTGTGCATAAGGAGAAATTTGACTAATGATAGTTATTTAATAAGGTGATCTTGTAAGTTGTAATATGCTTGTATACACTAAATTTTGTCTTTGCTTCTCTGTAGTTTGCCCTCAAGTG
GTTCATTCCTTATCTACGTTACAGAATATTTAAAATATAGTCGGCATTTGGCACTTACATGTTGACATATTCATATTCTTTATATTATGTGTATGGAGTCATTTAGCATATAACAAAAAGAAGAAGAAGAAATTAGGAGCAAAGATTCAATTTTTATTTTTCAAGAATCTTCATCCTTTTAGTTTCTTGATTTTTCGCGCTTTTTAATTAAGACATTCATTCAAGAAATGCAGTTTGTTTGTTGAAAATATTAAAACAGAATCACCCTTGTTTGTGTATTTTGATAGAAGTTGCTATTTTCTTGATCTTGATCTTGACTAGTCGTTTTGGCGAAAAAATGAGTATTCAGAACTATGAATTAGCAAGTGATTGCAACTTAGAGTTCCCACAGATGGGATTTTGTTTCCAGCCTGAAAACTCTGCAGAAAATGGTTGTCAACAGCAGCAGCAACAGAATTTTTGGCCTAGTACTGATTCATCATCATCGAGAACGATTATAAGTCGAATAGGATCATCACCTTCTGCTTTTTTTGCTACAGAGAGGTACCTTGGATTAACACAATATGAAAACCAAGACAACAATAATAGTTGTTCTCAACTATCCAAGAATCTTGGTCCTCAAACTACGTCGTTTACTCAGCAATGTGGAAATGGATTCTTGGCAGATTCATCAGCACGAGTTGACACCGATTTTCCTAAGATTTCAATGCCATCATTCATCAGATCACAGTTTTCAAGTAGTCAACCATTTGGTCCTGAAGGACTCTATGGAAATCCCTTTAGTAATCTATCAGAGAAAGAGAGGATTTTGCTTCTTAAGAGCAAGTTGTTTAGAGAAATTGACTCTTCAAATAGGCAGCCTGCTTCAATCCCTTTTCAAGGAAATCAAGACTATGGTGTCTCAAATAATACATGTGGTTTTAACTTGGTACATATAAGGCAACAATCTGGAAGTCAATCAGCAAATAGTTTTAACAACTCTGGATGTTCTGGAGGATCTTTATCGAGTAAGGCACGAATCAGGTGGACTCAGGATCTTCATGATCGATTTGTTGAGTGTGTAAATCGTCTTGGAGGAGCTGACAAGGCGACGCCAAAGGCAATACTAAAGCTGATGGATTCAGAAGGATTAACAATTTTTCATGTAAAAAGTCATTTACAGAAATATCGAAATGCAAAGTTCATCCCTGAATCGACAGAAGGGAGATCTGGAAAAACAGACAGCCCGAATAATGTGTCACAGATCGACAGCAAAACTGGAATGCAAATCAAAGAAGCATTGCATATGCAGCTAGAAGTCCAGAGGCGTCTTCACGAGCAACTAGAGATTCAGCGGAAGTTACAATTGAGGATCGAAGAACAAGGGGAGCAGTTGAAGAAGATATTTGAACAACAACAACAAACAACTAGGAGTCTCTTGGAGACACGAAATTCAAGCATTTCGTCTCCTGCTGATCAGTTCACCCCGCACGAAGATGAAGTTTTTGCTGCAGAAAGCTTCAATAATACTCATTTCCAATCTAATATAAGTTACAATGACATGTAAACAACATTAGTTTTACATTTTTTCAGCTAGTTTTTGAAAGAGAGTCGACGTTAGCATTTCTGTAAAGATAATTTTGCCTCCCAAGCAAACTACACAAAAAAAAAATGTATATTACAAAGTGAAGACATAAATATCATGCAAAAACTTAAAGTACTTCATTCATGCTATATGTTCAATGGTGCTCTGGTGTGCATAAGGAGAAATTTGACTAATGATAGTTATTTAATAAGGTGATCTTGTAAGTTGTAATATGCTTGTATACACTAAATTTTGTCTTTGCTTCTCTGTAGTTTGCCCTCAAGTG
Protein sequence
Protein sequence
| translated polypeptide sequence |
>PGSC0003DMT400029758 Transcription factor
MSIQNYELASDCNLEFPQMGFCFQPENSAENGCQQQQQQNFWPSTDSSSSRTIISRIGSSPSAFFATERYLGLTQYENQDNNNSCSQLSKNLGPQTTSFTQQCGNGFLADSSARVDTDFPKISMPSFIRSQFSSSQPFGPEGLYGNPFSNLSEKERILLLKSKLFREIDSSNRQPASIPFQGNQDYGVSNNTCGFNLVHIRQQSGSQSANSFNNSGCSGGSLSSKARIRWTQDLHDRFVECVNRLGGADKATPKAILKLMDSEGLTIFHVKSHLQKYRNAKFIPESTEGRSGKTDSPNNVSQIDSKTGMQIKEALHMQLEVQRRLHEQLEIQRKLQLRIEEQGEQLKKIFEQQQQTTRSLLETRNSSISSPADQFTPHEDEVFAAESFNNTHFQSNISYNDM*
MSIQNYELASDCNLEFPQMGFCFQPENSAENGCQQQQQQNFWPSTDSSSSRTIISRIGSSPSAFFATERYLGLTQYENQDNNNSCSQLSKNLGPQTTSFTQQCGNGFLADSSARVDTDFPKISMPSFIRSQFSSSQPFGPEGLYGNPFSNLSEKERILLLKSKLFREIDSSNRQPASIPFQGNQDYGVSNNTCGFNLVHIRQQSGSQSANSFNNSGCSGGSLSSKARIRWTQDLHDRFVECVNRLGGADKATPKAILKLMDSEGLTIFHVKSHLQKYRNAKFIPESTEGRSGKTDSPNNVSQIDSKTGMQIKEALHMQLEVQRRLHEQLEIQRKLQLRIEEQGEQLKKIFEQQQQTTRSLLETRNSSISSPADQFTPHEDEVFAAESFNNTHFQSNISYNDM*
Gene model matches
Gene model matches
|
SGN Unigenes
SGN Unigenes
| [Associate new unigene] |
Unigene ID:
[loading...]
GenBank accessions
GenBank accessions
| [Associate new genbank sequence] |
AB192880 Solanum tuberosum PPS4 mRNA for MYB-CC type transfactor, complete cds.
| Other genome matches | None |
Literature annotations [1]
Literature annotations [1]
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Involvement of PPS3 phosphorylated by elicitor-responsive mitogen-activated protein kinases in the regulation of plant cell death.
Plant physiology (2005)
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Mitogen-activated protein kinase (MAPK) cascades play pivotal roles in plant innate immunity. Overexpression of StMEK1(DD), a constitutively active MAPK kinase that activates salicylic acid-induced protein kinase (SIPK) and wound-induced protein kinase (WIPK), provokes hypersensitive response-like cell death in Nicotiana benthamiana. Here we purified a 51-kD MAPK, which was activated in potato (Solanum tuberosum) tubers treated with hyphal wall elicitor of a plant pathogen, and isolated the cDNA designated StMPK1. The deduced amino acid sequence of the StMPK1 showed strong similarity to stress-responsive MAPKs, such as tobacco (Nicotiana tabacum) SIPK and Arabidopsis (Arabidopsis thaliana) AtMPK6. To investigate the downstream signaling of StMPK1, we identified several proteins phosphorylated by StMPK1 (PPSs) using an in vitro expression cloning method. To dissect the biological function of PPSs in the plant defense, we employed virus-induced gene silencing (VIGS) in N. benthamiana. VIGS of NbPPS3 significantly delayed cell death induced by the transient expression of StMEK1(DD) and treatment with hyphal wall elicitor. Furthermore, the mobility shift of NbPPS3 on SDS-polyacrylamide gel was induced by transient expression of StMEK1(DD). The mobility shift of NbPPS3 induced by StMEK1(DD) was not compromised by VIGS of WIPK or SIPK alone, but drastically reduced by the silencing of both WIPK and SIPK. This work strongly supports the idea that PPS3 is a physiological substrate of StMPK1 and is involved in cell death activated by a MAPK cascade.
Katou, S. Yoshioka, H. Kawakita, K. Rowland, O. Jones, JD. Mori, H. Doke, N.
Plant physiology.
2005.
139(4).
1914-26.
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