EST details — SGN-C14380

Search information 
Request: SGN-C14380Match: SGN-C14380
Request From: web userMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C14380Clone name: cLEC-7-L24
cartOrder Clone
Library Name: cLECOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination

Microarray: Alias clone SGN-C172965 is on microarray TOM1: SGN-S1-1-6.3.20.8
This clone has been mapped as cLEC-7-L24.
Additional sequencing 
Clone: SGN-C172965 [TUS-14-O11] Trace: SGN-T195154 EST: SGN-E393828 Direction: 3' Facility: INRA
Clone: SGN-C172965 [TUS-14-O11] Trace: SGN-T195154 EST: SGN-E398992 Direction: 3' Facility: INRA
Clone: SGN-C172965 [TUS-14-O11] Trace: SGN-T195155 EST: SGN-E393829 Direction: 3' Facility: INRA
Clone: SGN-C172965 [TUS-14-O11] Trace: SGN-T195608 EST: SGN-E394282 Direction: 5' Facility: INRA
Clone: SGN-C172965 [TUS-14-O11] Trace: SGN-T200196 EST: SGN-E398993 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E202223Length: 451 bp (976 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E202223 [] (trimmed) ATTTTCTAAAGCTTCTGAAAAAGATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGA
TGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAATCTTGTTCAATCTCTACAATCTGTTGGAG
AACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAAGTTGGCCACTGCCGGGAAGGTTACTGAACACATTTTGTCGTCCATCAAAATGAT
GGATAACTTCTTGAAGGAGTGGAATCTTGGAGTCAAAGATCAGAGAGAGCTGTTTCTTGCAATCTCCAACATTTTAAAGGAAAGCACAGGCTCTA
CAAAAGATTCTTTCATGTTTCTTACAAAGTATCTGGAAACCTTTTCGTCTGAAGATGCTTCTAATATGACT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E202223] SGN-U584343 Tomato 200607 Build 2 48 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T25505 [Download] [View] Facility Assigned ID: TCABB72TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.954 Expected Error Rate: 0.0086 Quality Trim Threshold: 14.5