EST details — SGN-T177580
| Search information |
| Request: TPTAA06TH | Match: SGN-T177580 |
| Request From: web user | Match Type: Chromatogram internal Identifier |
| Clone information |
| SGN ID: SGN-C109777 | Clone name: cLPT-1-A11 |
| ||
| Library Name: cLPT | Organism: Solanum pennellii (formerly Lycopersicon pennellii) |
Tissue: leaf trichomes
Development Stage: 4-8 weeks old
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C109777 [cLPT-1-A11] | Trace: SGN-T177581 | EST: SGN-E366156 | Direction: 3' | Facility: TIGR |
| Sequence |
| Sequence Id: SGN-E366155 | Length: 606 bp (940 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E366155 [] (trimmed)
CAAAATCATTTACGACAGTTCTGTTATCAAGCACTGAAAATGACCCCAGGGGGTAGAGGCCCACAATTTCCTGGCTCACATCCAGTCTCTCTTGA
CAGGGAAAACTTGCAGTTATTAAGGCAGCGTTACTACTATGCCACTTGGAAGGCTGATGGGACACGGTATATGATGCTGATCACGATGGATGGTT
GTTTCTTAATTGATAGGCATTTCAACTTTCGGAGGGTTCAGATGAGATTTCCTTGCAGACACACTAATGAAGGTTTAGCCGAAAAGACCCACCAC
TTCACCTTACTTGATGGAGAGATGGTAATTGATACTTTGCCTGACACACAGAAGCACGAAAGGAGATACCTAATTTATGATATGATTGCTTTGAA
CCAATTGTCTGTCATTGAGCGACCCTTTTATGAACGGTGGAGAATGATCGACAAAGAAGTGATTGGTCCAAGGAATTATGAACGTCAACATATAT
ACCAGAGTAGAAACCCTTATTATAGATATGAGTTGGAGCCTTTCAGGGTGAGGAGGAAGGATTTTTTTCTGCTCTCTACTGTCACGAAACTTCTC
AAAGAATGTATCCCAAAGCTTTCACATGAAGCTGAT
CAGGGAAAACTTGCAGTTATTAAGGCAGCGTTACTACTATGCCACTTGGAAGGCTGATGGGACACGGTATATGATGCTGATCACGATGGATGGTT
GTTTCTTAATTGATAGGCATTTCAACTTTCGGAGGGTTCAGATGAGATTTCCTTGCAGACACACTAATGAAGGTTTAGCCGAAAAGACCCACCAC
TTCACCTTACTTGATGGAGAGATGGTAATTGATACTTTGCCTGACACACAGAAGCACGAAAGGAGATACCTAATTTATGATATGATTGCTTTGAA
CCAATTGTCTGTCATTGAGCGACCCTTTTATGAACGGTGGAGAATGATCGACAAAGAAGTGATTGGTCCAAGGAATTATGAACGTCAACATATAT
ACCAGAGTAGAAACCCTTATTATAGATATGAGTTGGAGCCTTTCAGGGTGAGGAGGAAGGATTTTTTTCTGCTCTCTACTGTCACGAAACTTCTC
AAAGAATGTATCCCAAAGCTTTCACATGAAGCTGAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E366155] | SGN-U575648 | Tomato 200607 | Build 2 | 17 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T177580 [Download][View] | Facility Assigned ID: TPTAA06TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.976 | Expected Error Rate: 0.0077 | Quality Trim Threshold: 14.5 |
Working
