EST details — SGN-T116750
| Search information |
| Request: TRXBN43TH | Match: SGN-T116750 |
| Request From: web user | Match Type: Chromatogram internal Identifier |
| Clone information |
| SGN ID: SGN-C92194 | Clone name: cLEX-10-H14 |
| ||
| Library Name: cLEX | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: fruit-set stage/post-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C192348 [TUS-65-G2] | Trace: SGN-T344394 | EST: SGN-E543519 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C192348 [TUS-65-G2] | Trace: SGN-T344395 | EST: SGN-E543520 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E304976 | Length: 518 bp (1295 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E304976 [] (trimmed)
GACAATTTAAAAGATAGATATGACCACCTGAAGTTGGTCGTCCTTCCACAGCCATGGAAAAGGGAGAAAGCTCTACTCCTACACTTTCCGAAGAC
GAAGTCTGGGCCAAACTCATACCGACAGACTCTCGCTATTCAGAAATTGAGTTAAGGTTGAAGGAGACCGTAATATGCAGTGAAGTAAAGCATTC
TTCTTCTGAAAAGCAAGATTGGTGTAAAATAACAAGGAATGTGGATCTAGATTCTGCCATGATGCAAAATAGAAGTTTGAAAGAAATTCTTGTTG
ATGAGACGGTTGTTCACGAAGAGCATGCTGCTGTAATTAAGTGTGGCAGTGAAATTTCACTAGGTCCCAGTGATGAAGGTTATGTGAAATACCGA
TTCGAAATAATGCCTACTGAGGAATCTCGCAGGTACATACAGATTTATCTCGATGTCGAGTATGCAAAATGCTGTATCTGCTTGAACATCTGGCA
TGATGTTGTCACAGCTGCACCTTGCCTTCACAATTTCTGAGTG
GAAGTCTGGGCCAAACTCATACCGACAGACTCTCGCTATTCAGAAATTGAGTTAAGGTTGAAGGAGACCGTAATATGCAGTGAAGTAAAGCATTC
TTCTTCTGAAAAGCAAGATTGGTGTAAAATAACAAGGAATGTGGATCTAGATTCTGCCATGATGCAAAATAGAAGTTTGAAAGAAATTCTTGTTG
ATGAGACGGTTGTTCACGAAGAGCATGCTGCTGTAATTAAGTGTGGCAGTGAAATTTCACTAGGTCCCAGTGATGAAGGTTATGTGAAATACCGA
TTCGAAATAATGCCTACTGAGGAATCTCGCAGGTACATACAGATTTATCTCGATGTCGAGTATGCAAAATGCTGTATCTGCTTGAACATCTGGCA
TGATGTTGTCACAGCTGCACCTTGCCTTCACAATTTCTGAGTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E304976] | SGN-U563891 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T116750 [Download][View] | Facility Assigned ID: TRXBN43TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.969 | Expected Error Rate: 0.0095 | Quality Trim Threshold: 14.5 |
Working
