EST details — SGN-C177366

Search information 
Request: 177366Match: SGN-C177366
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C177366Clone name: TUS-26-F20
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C177366 is on microarray TOM1 spot ID 1-1-5.2.6.4 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C37297 [cLEG-41-K16] Trace: SGN-T72106 EST: SGN-E259074 Direction: 5' Facility: TIGR
Clone: SGN-C177366 [TUS-26-F20] Trace: SGN-T182643 EST: SGN-E370029 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E370030Length: 611 bp (918 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E370030 [] (trimmed) GACAAATAATTTAATATATTTATTTTGTATAACTGTAACATACTTTTGTTGGAGTTCGTATAGTTGAAAATTCCTTTACAAGTATAACTGGTTGC
TACTCTTCCTTTATATACAGTCGCCCTACACCATATAACCTATATTGCTTGCTTCTATACTTGTCAAACAGAACTCAGGTTTCACTGAACAAAAC
TTTCTTCCCCAAGCATTCAACAGCTGGGCAACTACTCTTCACCAGGCCACTAAATTAGCATTCTAGAAACTGTTTGTTCTCTGACCAACTGCAGC
CCGTGGACCATCCCAAAACACCCAGGATCATGTCAATCCTCGAACTTGCACCAACCAAGCTCTCTAGGTTGGCTTCAATATGAAATAGCGCGACA
CCGATTCCCTTCCCTCTATCCGTCTCAGCCGCACAAGAACATATGATGACGCCTACAGCTGCCAATGCTGAAGTAATATCGGCCATCATGCCTTT
TCGATCTATGCTGACAACACAAAACCACTGAACAGAGTGCCCTTCCAGGTTTTGCCAAGTTGCAACTTTGCTAGCCATCCAGCCGTCTAATCCAG
GCAGAACATCCTTGTACCTTGGTATGTTAGCAAGTATCATT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E370030] SGN-U578166 Tomato 200607 Build 2 6 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T182644 [Download][View] Facility Assigned ID: FA0AAD14DC10RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.971 Expected Error Rate: 0.0037 Quality Trim Threshold: 14.5