EST details — SGN-C183993

Search information 
Request: 183993Match: SGN-C183993
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C183993Clone name: TUS-43-J23
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183993 is on microarray TOM1 spot ID 1-1-2.2.18.5 [Order] [Tomato Microarray Database]
See unigene SGN-U585837 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C5623 [cLEC-32-H4] Trace: SGN-T30041 EST: SGN-E207828 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E396719Length: 548 bp (854 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E396719 [] (trimmed) GGCAGAATGGGCATGGAAGCAACACGGAGAAGGGAACACTGCCATCGATAATATGTTAGATACGGATATCAAAGAAACATGCTACTTGGAAGAAA
TGAAGACAGTGTTCAGACTCGGGCTTATATGCACGAGCAACTTACCTGCGAGCAGGCCTTCCATGAAAGAGATTCTGCAGATACTTCATCGATGC
AAGTCCTTTAGGTATTCTGGAGGAAAATCACCAGATACAGAGTATGATGTTGCTCCTCTCCTTAGCGGGAACAACAGCGAAAAATACATTGCTAG
TTACAAACGTATTAATTCCAATAAGGTAATAGATGATAGTAGTGATGATGGTCTAATAATTTCCAGTGTGTAATATTACAGATGCCAAAGTAATC
TGATCATAGAAATAGGTCACCAGAATAGTACCACCACTAAGTACAAGTTTGGGCATTTTGTAAGAATAGAAAACCCCCTATAAAAATGTTGTTTT
CCTAGTGTAGTCTTGAATTTTTAACAGCTTTATTTGTTCACTGCACTGAAAATGCATCCTTTTGACTTTTGCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E396719] SGN-U585837 Tomato 200607 Build 2 21 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T198045 [Download][View] Facility Assigned ID: FA0AAD31CE12RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.967 Expected Error Rate: 0.0006 Quality Trim Threshold: 14.5