EST details — SGN-E275301
| Search information |
| Request: 275301 | Match: SGN-E275301 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C69383 | Clone name: cLEN-9-P9 |
| ||
| Library Name: cLEN | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: red ripe to over-ripe
Microarray: Alias clone SGN-C180775 is on microarray TOM1: SGN-S1-1-4.4.17.18
See unigene SGN-U570669 for alternative clones/ESTs which are mapped
| Additional sequencing |
| Clone: SGN-C180775 [TUS-35-D21] | Trace: SGN-T196377 | EST: SGN-E395051 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180775 [TUS-35-D21] | Trace: SGN-T199712 | EST: SGN-E398386 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E275301 | Length: 531 bp (889 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E275301 [] (trimmed)
GCGAGAAGAAATTGTTAGGTTAGTTGGTCGAAAAATGAAGAGAGGTTACGTGTTTGGTGATGCGCTCGACATGTGTTTCGATAGCGTCCATTCGA
TGGAAATTGGACGATTGATAGGTGACATGACGTTGCAATTTGAAAATGGAGTTGAGATTTTGATCAATAAGGAAAGGATGTTAGATGAAGTGGAG
GGTGGGATCCATTGTGTTGGGATCGGACGGTCAGAATCACTTGGTATTGCAAGTAATATTATTGGCAATTTTCATCAGCAAAATCTATGGGTAGA
ATTTGATTTGAGAAATCGAAGAGTGGGATTTGGAAAAGGTGAGTGTAGTACACAAGTGTAATGGGCATTAATTATATACTATGGTATATATTTTC
ATAAGATTATATATCATTATAAGGGTGAAACTCGAGCATCGAAGAGATTAGAGGTCTATATGTCTTGACCTAATTTTCTGAATATCACGTGCTCA
TTCCATATATATTGAATGATAATATGGAGCTAGCCATGGCTTTAAGTTTTAAATGC
TGGAAATTGGACGATTGATAGGTGACATGACGTTGCAATTTGAAAATGGAGTTGAGATTTTGATCAATAAGGAAAGGATGTTAGATGAAGTGGAG
GGTGGGATCCATTGTGTTGGGATCGGACGGTCAGAATCACTTGGTATTGCAAGTAATATTATTGGCAATTTTCATCAGCAAAATCTATGGGTAGA
ATTTGATTTGAGAAATCGAAGAGTGGGATTTGGAAAAGGTGAGTGTAGTACACAAGTGTAATGGGCATTAATTATATACTATGGTATATATTTTC
ATAAGATTATATATCATTATAAGGGTGAAACTCGAGCATCGAAGAGATTAGAGGTCTATATGTCTTGACCTAATTTTCTGAATATCACGTGCTCA
TTCCATATATATTGAATGATAATATGGAGCTAGCCATGGCTTTAAGTTTTAAATGC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E275301] | SGN-U570669 | Tomato 200607 | Build 2 | 13 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T89173 [Download][View] | Facility Assigned ID: TRRBI89TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.934 | Expected Error Rate: 0.0095 | Quality Trim Threshold: 14.5 |
Working
