EST details — SGN-E280414

Search information 
Request: 280414Match: SGN-E280414
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C72368Clone name: cLER-1-P17
cartOrder Clone
Library Name: cLEROrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C178687 is on microarray TOM1: SGN-S1-1-4.1.3.3
See unigene SGN-U577771 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C178687 [TUS-29-M21] Trace: SGN-T183866 EST: SGN-E370525 Direction: 3' Facility: INRA
Clone: SGN-C178687 [TUS-29-M21] Trace: SGN-T183867 EST: SGN-E370526 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E280414Length: 254 bp (728 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E280414 [] (trimmed) GGCCACAAAAAACTAGATAGCAACTTTTGTGATAACAATAGAGGGAAAATGTGAAAAGTAAATGCTCATGAAACAAAATGAAGTGTTGTTTTTTA
TTAAAATGGAAATGGTTGTAATTTAAGCAGGAAGCTCCTCCTCCTTGTGAGTCTCAATGGTAACATCACCCTTTGGGTAAGCAACACAAGTAAGC
ACAAATCCAGGAGCTTCTTGGGCCTCATCAAGGAAGTTTCCATCAAACTGATCAACACTTTCAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E280414] SGN-U577771 Tomato 200607 Build 2 330 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T91968 [Download][View] Facility Assigned ID: TPRAC93TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.913 Expected Error Rate: 0.0245 Quality Trim Threshold: 14.5