EST details — SGN-E283979

Search information 
Request: 283979Match: SGN-E283979
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C69984Clone name: cLER-13-D18
cartOrder Clone
Library Name: cLEROrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C184415 is on microarray TOM1: SGN-S1-1-4.4.16.7
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C184415 [TUS-44-L13] Trace: SGN-T198314 EST: SGN-E396988 Direction: 3' Facility: INRA
Clone: SGN-C184415 [TUS-44-L13] Trace: SGN-T198315 EST: SGN-E396989 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E283979Length: 454 bp (927 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E283979 [] (trimmed) GTCGAACTGTGATGGAGGTACAAAGAGGCGCAGGTGGCACATGCCGATATTGGCCATGACTGCTGATGTTATTCATGCCACATTAGAGAAATGCC
TCAAGTGTGGGATGGATGGTTACGTCTCAAAACCATTCGAGGAAGAGAATCTTTATGAAGCTGTATCCAAGTTCTTTGAATCCAAGCCTAACTCG
GACGAATAGCTAAGTACACCTATTCTACTGCTTTTGCTGCACCTCTCGGCTGAAACGGACTACCAGCAAATTTTCAGCATCCTGCTGGTGCATAT
TCTTGTTTGACTTGTTCTAGTGTATGGACATGATTAGCCACATTTAGCAAGTGATTAACATCTAACCAGTTTAGACCTCTGACATGATTAGCTTC
TTAAGTATATATTGTTGTATGTATACTGCAAAAGAGCTTCTATCCCTCTCTTGTATGTACATTTAAAAGGGGAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E283979] SGN-U576830 Tomato 200607 Build 2 4 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T94673 [Download][View] Facility Assigned ID: TPRBZ21TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.975 Expected Error Rate: 0.0119 Quality Trim Threshold: 12.5