EST details — SGN-E294817
| Search information |
| Request: 294817 | Match: SGN-E294817 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C81599 | Clone name: cLET-17-F18 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C185036 is on microarray TOM1: SGN-S1-1-7.2.12.18
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C185036 [TUS-46-F10] | Trace: SGN-T191999 | EST: SGN-E390673 | Direction: 5' | Facility: INRA |
| Clone: SGN-C185036 [TUS-46-F10] | Trace: SGN-T192253 | EST: SGN-E390927 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E294817 | Length: 513 bp (799 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E294817 [] (trimmed)
AAATGGCTAGTATTCCTAGTACCATAGTTAACACTAGTTTCTTGCCAAGAAGAAGTGTTGTTACTAGCCTTAAATCCATACCAAATGTTGGTGAA
TCTCTCTTTGGTCTTAAAAGTGGTAGAAGTGGAAGGATTACTTGCATGGCTACATACAAAGTGAAGCTTATTACACCAGAAGGACCTTTTGAATT
TGATTGTCCTGATGATGTCAGCATTCTTGATCGGGCGGAGGAAACGGGGCTAGATCTTCCTTATTCATGTAGGGCTGGTGCTTGCTCATCTTGTG
CTGGAAAGGTTACTGCTGGAAGTGTTGATCAGTCTGATAACAGTTTTCTTGATGATGACCAAATAGATGAAGGATTTGTGCTCACTTGTGTTGCT
TATCCAAAGTCTAATGTTACCATTCAGACTCACAAGGAGGAGGACCTTGTTGGCTAACTAGTATTTTACTTCTTTTCTTATCAATAATTAAATTA
GGTGCTATGTACCTCTTTTATATAAGTCAATGATGACT
TCTCTCTTTGGTCTTAAAAGTGGTAGAAGTGGAAGGATTACTTGCATGGCTACATACAAAGTGAAGCTTATTACACCAGAAGGACCTTTTGAATT
TGATTGTCCTGATGATGTCAGCATTCTTGATCGGGCGGAGGAAACGGGGCTAGATCTTCCTTATTCATGTAGGGCTGGTGCTTGCTCATCTTGTG
CTGGAAAGGTTACTGCTGGAAGTGTTGATCAGTCTGATAACAGTTTTCTTGATGATGACCAAATAGATGAAGGATTTGTGCTCACTTGTGTTGCT
TATCCAAAGTCTAATGTTACCATTCAGACTCACAAGGAGGAGGACCTTGTTGGCTAACTAGTATTTTACTTCTTTTCTTATCAATAATTAAATTA
GGTGCTATGTACCTCTTTTATATAAGTCAATGATGACT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E294817] | SGN-U579122 | Tomato 200607 | Build 2 | 70 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T106872 [Download][View] | Facility Assigned ID: TMECP33TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.959 | Expected Error Rate: 0.0229 | Quality Trim Threshold: 12.5 |
Working
