EST details — SGN-E373532

Search information 
Request: 373532Match: SGN-E373532
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179386Clone name: TUS-31-J24
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179386 is on microarray TOM1 spot ID 1-1-1.2.2.17 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C82155 [cLET-1-B18] Trace: SGN-T102701 EST: SGN-E292427 Direction: 5' Facility: TIGR
Clone: SGN-C179386 [TUS-31-J24] Trace: SGN-T185669 EST: SGN-E373531 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E373532Length: 692 bp (869 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E373532 [] (trimmed) GTTGGACAAGAATATGATTCTCTTTCTACTCTTTGTAGCCTTTGCAATTTTGCTCATTTTTCTCCTTAGTGGAAAAAGAAATCTGCCACCAGGTC
CTATAGGCCTTCCATTCATTGGAAATTTGCATCAATATGATAGTTTAACTCCTCATCTCTATTTTTGGAAACTTTCCAAAAAATATGGAAAAATC
TTCTCATTGAAACTTGGTTCTTCAATTATGGTTGTAGTTTCTTCAGCAAAATTAGCAAAAGAAGTATTGAAGACACAAGATTTAGTATATTGTAG
TAGACCTTCTCTTCTTGGACAACAAAAATTGTCTTACAATGGTCATGATATTGCATTTTCACCTTACAATGACTATTGGAGAGAAATGAGAAAAA
TTTGTGTGCTTCAATTATTTAGTCTGAAAAAAGTACAATCTTTTAGTCCGATTCGTGAAGATGAAGTATCAAGAATGATCAAGAAAATATCTCAA
CAAGCTGCGTGTTTTCAAATGACAAATTTGAGTAGTTTAATGATTTCATTAACAAGTACGATAATATGTAGGGTTGCTTTTGGTGTTAGGTTTGA
TGAAGAAGCGCATGAAAGAAAGAGATTTGATTATCTTTTAGCTGAGGCTCAAGCTATGATGGCTACCTTTTTTGTGTCTGATTTTTTTTCTTCTT
TAAGTTGGATTGATAAACTTACTGGAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E373532] SGN-U580549 Tomato 200607 Build 2 5 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T185670 [Download][View] Facility Assigned ID: FA0AAD19DE12RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.935 Expected Error Rate: 0.0037 Quality Trim Threshold: 14.5