EST details — SGN-E375408

Search information 
Request: 375408Match: SGN-E375408
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C173284Clone name: TUS-15-L18
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173284 is on microarray TOM1 spot ID 1-1-7.4.19.2 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C1973 [cLEC-14-H15] Trace: SGN-T26465 EST: SGN-E204849 Direction: 5' Facility: TIGR
Clone: SGN-C173284 [TUS-15-L18] Trace: SGN-T189021 EST: SGN-E375407 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E375408Length: 658 bp (921 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E375408 [] (trimmed) AAGGAATGCATGGGATGGGAATGATGGGATCACTTGGTTCAACTTCACCAATGCGCCCCGCAGGGATTTCTCCTCAGCAACTGAGACCTGTCTCC
TCTGCAATCAGACCTCAGACGAGCATCGGTAGTCAGTCTGCTGCTACACAGAATTTTCAAGGACATAGCATGTTGAGAGTTCAGTCAGTCGGATT
TCCGCCATCCCAATCACATACTACTACCTCTCAAAGTCCAAAGACACAGACTCAGCCATGGTTATCTTCAGGAGCACCGGGGAAGCCCCCTTTGC
CGACACCATCATTGAGACCTCAAATTAATCCTCAGTCTTTGCATCAAAGGTCCCATATTCTTGCAGCGCATCAGCATACTGTTACTACTTCATCC
TCTGCCCAACAGTCACAGCCTTCAACCTCAAGTCAGTCCCAAGATCATTTGGGGCAACAGATGCCTCCATCCAGGATTCAACAATCATTATCTAA
TCAAGCACTTGGCCGGGGTCAGGGTTTAGGAATCCAGAGACCTTCATCACATGCATTGATGCAACCCACCTGCAGTCCAGCCAGGGCTACCTAGT
AAGGCTGCTACCACTTTAGAGATGGGAGATCCTTGTACTAGGATTCTAAGCAAGAGAAGCATCCAAGAGATTGTGACCCAGATTGATC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E375408] SGN-U583969 Tomato 200607 Build 2 9 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T189022 [Download][View] Facility Assigned ID: FA0AAD3DF09RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.968 Expected Error Rate: 0.0039 Quality Trim Threshold: 14.5