EST details — SGN-E377030

Search information 
Request: 377030Match: SGN-E377030
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175181Clone name: TUS-20-K19
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175181 is on microarray TOM1 spot ID 1-1-6.3.13.8 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C24049 [cLED-7-A8] Trace: SGN-T50499 EST: SGN-E231990 Direction: 5' Facility: TIGR
Clone: SGN-C175181 [TUS-20-K19] Trace: SGN-T1349 EST: SGN-E378509 Direction: 5' Facility: Giov. Lab
Clone: SGN-C175181 [TUS-20-K19] Trace: SGN-T189784 EST: SGN-E377029 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E377030Length: 721 bp (914 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E377030 [] (trimmed) CAGCAAAAATATAAAGTTTGTATAGCAAGATGGCTTCAACACTGTTACTAGTTTTGGTTTTTGTGCTTGATTTGATTGCTTTTGGACTTGCTGTT
GCTGCTGAGCAGAGGAGGGCTACTGCAACGATCAACAGAGATGCAGAGTATAACTACTGTGTGTATGAGTCAGATGTTGCAACTGGCTTGGGCGT
GGGTTCATTCTTCTTTCTTTTATCTAGTCAGCTCCTCATAATGTTTGCAAGCCGATGTTTATGCTGTGGGAGGGCACTGCGACCAGGAAAGCCCC
GATCATGGGCTATTGTCTTATTCATCACCTGCTGGGTCACCTTCTTTATTGCTGAAGTGTGCTTACTGGCGGCTTCCGTTAGGAATGCCTACCAC
ACAAAGTATAGGACTTACTTGGCACAACATCCTCCATCCTGCGAGGTTTTGAGGAAGGGAGTCTTTGGTGCTGGCGCTGCTTTTATTGTTTTCAC
AGGCATCGTCTCTGAACTTTTCTACGTCAGCTATTCCAAGGCCGATGAAGGATCCATTCCTCCAAGAATGGATGGTGGCATAAGGATGAATGCGT
TCATGTGAATCCATTGAGCAGAAGGAGGTTTTGGTTGTATACTCTCTAAGCTTTTGCCCTTACTTAGACTGTGATATTGGTAACGTGGTATACTT
TACCCCTGTTGGCTTTGCTGATTTGACTTTAACAGAAATTAGAGATTTTGATCATT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377030] SGN-U569941 Tomato 200607 Build 2 11 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T189785 [Download][View] Facility Assigned ID: FA0AAD8AF10RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.968 Expected Error Rate: 0.0028 Quality Trim Threshold: 14.5