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EST details — SGN-E378479

Search information 
Request: 378479Match: SGN-E378479
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C185292Clone name: TUS-47-A2
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185292 is on microarray TOM1 spot ID 1-1-7.1.10.19 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C72127 [cLER-1-D7] Trace: SGN-T92142 EST: SGN-E280588 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E378479Length: 428 bp (1251 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E378479 [] (trimmed) AGATAAAAAGGCCTTGTCATTTTATCCGTTGGTATGAGTAATAAACTCTTATAAGCTCTCAGATTTATCTTTTCAAGAATACAAAAAGATTCAAT
CTTTTTGAAAGGTGACTATTTGGAAAGATGAGGGGAGGATTGTGGCAACTTGGACAATCGATCACCAGACGTCTGGCTCAGGCTGATAAGAAGAC
TATTGGTCGTAGATGCTTTGCTTCAGATGCTGATCTGAAGAAGACTGTTCTGTATGACTTCCATGTTGTCAATGGGGGAAAGATGGTGCCTTTCG
CTGGTTGGAGTATGCCTATCCAGTATAAGGACTCAATTATGGACTCAACAGTAAATTGTAGGGAGAATGGTAGTCTCTTTGATGTTTCTCATATG
TGTGGGCTAAGCCTNCAGGGGAAAGATACTATCCCTTTCCTGGAAAGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E378479] SGN-U579550 Tomato 200607 Build 2 99 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T1889 [Download][View] Facility Assigned ID: TUS47A2.ab1
Submitter: Koni Sequencing Facility: Giov. Lab
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Passed all screens and filters
Sequence Entropy: 0.953 Expected Error Rate: 0.0019 Quality Trim Threshold: 20.5