EST details — SGN-E390930

Search information 
Request: 390930Match: SGN-E390930
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C185044Clone name: TUS-46-F18
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185044 is on microarray TOM1 spot ID 1-1-7.2.11.1 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C86087 [cLET-41-P11] Trace: SGN-T110412 EST: SGN-E298375 Direction: 5' Facility: TIGR
Clone: SGN-C185044 [TUS-46-F18] Trace: SGN-T192002 EST: SGN-E390676 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E390930Length: 730 bp (886 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E390930 [] (trimmed) ACATTAAGGAACATTATTCCTTTATACCACAGAGAAGAAGAAAAAAAAAACCAGGAACATACCACATGGTAAAACAATAATAATTAAACTCAAAC
AACAAAAAACATAACACAATTAAGCAAAAGCAAATGGATTAAGCTTCCATAAGAAACTCCTTATCCTTCTCCAACCTCTCCATGGCATTTGCTTC
CAAGCTAATCTCCACATCAATTCCTCTTCCTCCATTTTTCTCTGGATACAAATACACCATCCCGTCAAATCTATTGTTCAACCCACTCCTCACGA
TCTCCGCTTTTCCCCATCCAAAATCAACCTCATACACCTTAAACCTCGGCGAACTCCCCACCGCCACACAGTTCACTCCGGCATCTTTGTACGCA
AATATCTTCGGACTACTCTCCCATTCCTTGTTCCTTTCTTCAATCGCCTTCGCATCGTGCTTCGCTATGGCTTGCTGAATCATCCCTGCCGCAAA
CTCAATCGGATTCGATAGCAGCAATCCCGCCGCCGTTACAGTGAAAATCGCCTGAATTAGGTTTCCGAAGTAACTCTCCGGCATCGGCGGATCGA
CTCTTTTACGGCAATCAGCGAACACGGTGTAAACCGTGTATTCCTCCGGTTTGAGCTGCCTCGCACGCGTGACAGCTAGCCACACGTGCGCGGAG
AGGGATTGGAAAGTAGAGAACGGCGTCGTATTATTTGCGCCTTCTCCTGGGTAAATATTGACTTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E390930] SGN-U581064 Tomato 200607 Build 2 36 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192256 [Download][View] Facility Assigned ID: FA0AAD34DC09FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.968 Expected Error Rate: 0.0014 Quality Trim Threshold: 14.5