EST details — SGN-E395051

Search information 
Request: 395051Match: SGN-E395051
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180775Clone name: TUS-35-D21
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C180775 is on microarray TOM1 spot ID 1-1-4.4.17.18 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C69383 [cLEN-9-P9] Trace: SGN-T89173 EST: SGN-E275301 Direction: 5' Facility: TIGR
Clone: SGN-C180775 [TUS-35-D21] Trace: SGN-T199712 EST: SGN-E398386 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E395051Length: 713 bp (881 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E395051 [] (trimmed) AATAATAACAAACAATATTTACAATAGCCCAACAAGCAATACGTATATATATATATACAACTTCAACATATCAAGAAACAAAATACATATACCAT
CTTCTTCATAGCTAAAACATATATAATTTGTAAAAAAGCAAATACTTTTTAATATGCCATAACATAACAAAAAATTTACCTTGGCTCAAAGAGGG
AAAAACTTCTTAATTGATATGTTGAAATGAGTTCCATCCTCCATGATTAGGGTTTGTTGAATATGCTATACCACATATATATAGTTATAAGTTAC
TACTTCAGCTTGATCCTGAACAATATATATATATATACATATGGAATAATTTTTTGATCTTATGAACTTATTTGTCGCACTGAAACCAATAAGCC
ACCTTTGAAAGAGGCAGTAAGGCCAGGAGAGAATCGAGGGTTGTGGTGATATGGTTGAGCTAACTCGACGTGAAATCTCCTTAGTAATGAGAGAG
CCACACTTTTAACCTCAACAAGTGCCATTTCTTTACCCAAACACACCCTAAGTCCAGCTTGAAATACTGGATACTTGAATGGATTTTCTTGGACA
AAAACCCCATCTTTCAACCATCTTTGAGGCTTAAACTCCAAAGCATCACAACCCCATAATTCTTCCATTCTTCCCATAGCATAAGGATGATAAGT
AACCCTTGTTCCTTTTTTCACAAAAGTCCCATCAAGTAAAAAAATCAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E395051] SGN-U585134 Tomato 200607 Build 2 19 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T196377 [Download][View] Facility Assigned ID: FA0AAD23CB11FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.939 Expected Error Rate: 0.0067 Quality Trim Threshold: 14.5