EST details — SGN-E538378

Search information 
Request: 538378Match: SGN-E538378
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C189339Clone name: TUS-57-I17
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C65122 [cLEM-8-G17] Trace: SGN-T85487 EST: SGN-E271936 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E538378Length: 604 bp (862 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E538378 [] (trimmed) AAACAACAAAAAAAAGTTATTACCCCTTTATTATTATAATAAACTAGAGATCAAATCTCATATCATCTTTAATCAAACCATGACAAACTGAACCC
TGGACAAGATTACCCACATAGCTTTAAAAAAAAACTATGTAAAATATCCCACCCGACCACCTAGACCTAGGCATATATTAATATTAACATATGCC
CTCTTTGTAACCATATTATATTAAAATATAGTTTTAGCAATAATAATAGTAGCCGTAAATAAAATACTCAACTAAAAAACCCAATAAACACAACC
AAATTTCAATATAAAAAAAAAAAAAAACCTTCTTTCATCAACCATTTGAATTTTACCCTTCAACTTTCCCTGGCTCCCCAAAAGCAGGGGCAAAA
TCCCCTGTTTTCTCTGCTTCGGGTTCTGCAACTGGGGCTGCTTCGGGTTCAACTACGGGTGCTGGAGCCCCCCCAACGGGGGCTGCAGCAACCGG
TTCCTCAGCTGCGGCTGCAGGTTCTTCTGCAGCCACAGGTTCTTCAACTGGAGCTGCAAAAGGTTCTGCTGCAACTGCCACTGGTTCTTCTGATT
CTGCGGGTACAGGTTCTGCAGCCCTAGGCTCTTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E538378] SGN-U581194 Tomato 200607 Build 2 457 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T339253 [Download][View] Facility Assigned ID: TUS57I17_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Passed all screens and filters
Sequence Entropy: 0.887 Expected Error Rate: 0.0087 Quality Trim Threshold: 20.5