EST details — SGN-C64673
| Search information |
| Request: 64673 | Match: SGN-C64673 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C64673 | Clone name: cLEM-6-N16 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C178175 is on microarray TOM1: SGN-S1-1-4.4.4.6
See unigene SGN-U577771 for alternative clones/ESTs which are mapped
| Additional sequencing |
| Clone: SGN-C178175 [TUS-28-H13] | Trace: SGN-T183491 | EST: SGN-E371131 | Direction: 3' | Facility: INRA |
| Clone: SGN-C178175 [TUS-28-H13] | Trace: SGN-T183492 | EST: SGN-E371132 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E270943 | Length: 524 bp (912 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E270943 [] (trimmed)
GCTTCCGATCATAGTTTTCATCGCCTCTCGTTAACTTCTAGATCTGGAACAAAAATGGCCAAAGATCCAGTTCGCGTTCTCGTTACTGGTGCTGC
AGGACAAATTGGATATGCCTTGGTGCCTATGATTGCCAGGGGAGTGATGTTGGGCGCAGATCAGCCTGTAATTCTCCACATGTTGGATATTCCAC
CTGCTGCTGAGGCACTGAATGGAGTGAAGATGGAATTAGTAGATGCTGCCTTCCCTCTTCTTAAGGGTGTCGTTGCCACAACTGATGCTGTTGAG
GCATGCACCGGTGTCAACGTTGCGGTCATGGTTGGAGGTTTCCCCAGGAAAGAAGGCATGGAAAGGAAAGATGTGATGTCAAAGAATGTGTCTAT
TTACAAGTCCCAGGCATCTGCACTTGAGAAGCATGCAGCTCCCAACTGCAAGGTGTTGGTTGTTGCTAACCCTGCTAATACAAATGCATTGATCT
TGAAAGAATTTGCACCATCCATTCCTGAGAAGAATATTACCTGTCTCAC
AGGACAAATTGGATATGCCTTGGTGCCTATGATTGCCAGGGGAGTGATGTTGGGCGCAGATCAGCCTGTAATTCTCCACATGTTGGATATTCCAC
CTGCTGCTGAGGCACTGAATGGAGTGAAGATGGAATTAGTAGATGCTGCCTTCCCTCTTCTTAAGGGTGTCGTTGCCACAACTGATGCTGTTGAG
GCATGCACCGGTGTCAACGTTGCGGTCATGGTTGGAGGTTTCCCCAGGAAAGAAGGCATGGAAAGGAAAGATGTGATGTCAAAGAATGTGTCTAT
TTACAAGTCCCAGGCATCTGCACTTGAGAAGCATGCAGCTCCCAACTGCAAGGTGTTGGTTGTTGCTAACCCTGCTAATACAAATGCATTGATCT
TGAAAGAATTTGCACCATCCATTCCTGAGAAGAATATTACCTGTCTCAC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E270943] | SGN-U577771 | Tomato 200607 | Build 2 | 330 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T84699 [Download][View] | Facility Assigned ID: TGFAX80TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.978 | Expected Error Rate: 0.0104 | Quality Trim Threshold: 14.5 |
Working
