EST details — SGN-C65482
| Search information |
| Request: 65482 | Match: SGN-C65482 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C65482 | Clone name: cLEN-10-E8 |
| ||
| Library Name: cLEN | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: red ripe to over-ripe
Microarray: Alias clone SGN-C180805 is on microarray TOM1: SGN-S1-1-6.2.17.11
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180805 [TUS-35-F3] | Trace: SGN-T196381 | EST: SGN-E395055 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180805 [TUS-35-F3] | Trace: SGN-T196382 | EST: SGN-E395056 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E275515 | Length: 595 bp (868 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E275515 [] (trimmed)
CCGCGTTAACAAGTTTCTTTTATGTGATTGGAAACAATCCACAAGTCGCTAAAGCCATTAGAGAAGAAGCTAATCGAGTTCTAGGTCCAAATGAA
GATCTCACAAGTTATGAACAAATGAGTGAGCTTCATTATCTACAAGCATGTGTTTATGAAAGTATGAGACTTTACCCTCCTATACAATTTGATTC
AAAGTTTTGTTTAGAGGATGATTTTTTACTTGATGGGACTTTTGTGAAAAAGGGAACAAGGGTTACTTATCATCCTTATGCTATGGGAAGAATGG
AAGAATTATGGGGTTGTGATGCTTTGGAGTTTAAGCCTCAAAGATGGTTGAAAGATGGGGTTTTTGTCCAAGAAAATCCATTCAAGTATCCAGTA
TTTCAAGCTGGACTTAGGGTGTGTTTGGGTAAAGAAATGGCACTTGTTGAGGTTAAAAGTGTGGCTCTCTCATTACTAAGGAGATTTCACGTCGA
GTTAGCTCAACCATATCACCACAACCCTCGATTCTCTCCTGGCCTTACTGCCTCTTTCAAAGGTGGCTTATTGGTTTCAGTGCGACAAATAAGTT
CATAAGATCAAAAAATTATTCCATA
GATCTCACAAGTTATGAACAAATGAGTGAGCTTCATTATCTACAAGCATGTGTTTATGAAAGTATGAGACTTTACCCTCCTATACAATTTGATTC
AAAGTTTTGTTTAGAGGATGATTTTTTACTTGATGGGACTTTTGTGAAAAAGGGAACAAGGGTTACTTATCATCCTTATGCTATGGGAAGAATGG
AAGAATTATGGGGTTGTGATGCTTTGGAGTTTAAGCCTCAAAGATGGTTGAAAGATGGGGTTTTTGTCCAAGAAAATCCATTCAAGTATCCAGTA
TTTCAAGCTGGACTTAGGGTGTGTTTGGGTAAAGAAATGGCACTTGTTGAGGTTAAAAGTGTGGCTCTCTCATTACTAAGGAGATTTCACGTCGA
GTTAGCTCAACCATATCACCACAACCCTCGATTCTCTCCTGGCCTTACTGCCTCTTTCAAAGGTGGCTTATTGGTTTCAGTGCGACAAATAAGTT
CATAAGATCAAAAAATTATTCCATA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E275515] | SGN-U585134 | Tomato 200607 | Build 2 | 19 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T89387 [Download][View] | Facility Assigned ID: TRRBL28TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.957 | Expected Error Rate: 0.0099 | Quality Trim Threshold: 14.5 |
Working
