EST details — SGN-C73216

Search information 
Request: 73216Match: SGN-C73216
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C73216Clone name: cLER-3-M4
cartOrder Clone
Library Name: cLEROrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C184281 is on microarray TOM1: SGN-S1-1-2.2.16.10
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C184281 [TUS-44-F23] Trace: SGN-T198281 EST: SGN-E396955 Direction: 3' Facility: INRA
Clone: SGN-C184281 [TUS-44-F23] Trace: SGN-T198282 EST: SGN-E396956 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E277393Length: 483 bp (822 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E277393 [] (trimmed) TTACACCCTTGTTTCGCAGCCAAGTGAAACAGGCAAAAAAATTGAGGCAGACTCAACTTGAGTACCTAACTCCTTTGGTACGAGACAGAAAGGCA
TTTGTGGACAGCAATGGAGATCCTAATAGCAGTGAATCAGAAATGGTAAGTCCAATTGGTGCAGCCTATGTTGATTCATTATTTAGTCTCGAGCC
ACCTGGCAGGAAACTAGGAGAAGCAGAGATTATCACACTTGTTTCAGAAACAATAGGTGCAGGAACTGATACAAGTGCCACAGCACTTGAATGGG
CATTGCTTCACTTAGTAATGAACCAAGAAATCCAAGAAAAACTCTACGAAGAAATAGTTGATTGTGTTGGTAAAAATGGTTCCATTTCAGAAAGT
GATGTTGAAAAATTGCCTTATCTTGGAGCCATTGTGAAGGAGACTTTTAGAAGGCATCCACCTAGCCATTTTGTTTTATCACATTCTGTAACAAA
TGACACAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E277393] SGN-U577985 Tomato 200607 Build 2 10 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T92281 [Download][View] Facility Assigned ID: TPRAJ74THB
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.941 Expected Error Rate: 0.0083 Quality Trim Threshold: 14.5