EST details — SGN-C78861
| Search information |
| Request: 78861 | Match: SGN-C78861 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C78861 | Clone name: cLES-6-P8 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C179120 is on microarray TOM1: SGN-S1-1-3.3.2.6
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179120 [TUS-30-O22] | Trace: SGN-T184555 | EST: SGN-E371941 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179120 [TUS-30-O22] | Trace: SGN-T184556 | EST: SGN-E371942 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E287082 | Length: 612 bp (852 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E287082 [] (trimmed)
CTATTTCCCCTCATCTTTAGGCTTTTCCCTTCTCTACATATATTCACTTCTTCACTTTCTTTTCATTCATTCTTCAAATTTTCATTTTAAAAAAA
TGGCTCAATTTTGCTTATTTCTTCTTTTAATCTCTCTTGTTTCTGTCCCCTGTGTTCTCTCTCGTTCTTTGTCATCTTCTTCACATCCTCACACC
CAAATCTTCGATGTTGCAGCATCCATTGAGAAAACTGTTCAAGTTCTTACTCCTGCTACACAAAGTTTTCAACAAGAAGCAATTCAGAGTGCCCA
TTTTAATTCTTCTTCAATATCTGTATCAATTTATCCTCGTTCAGCTCTTGTTAAGCCCCGCCATAAAGATTATGCAGCTCTCACTCTTTCTCGAC
TTGAACGTGATTCGGCTCGAGTTTCTTCACTCACCATGAAGCTCCACCTCGCGTTAAACAACTTTAATCACTCGGATCTCAAGCCGGTGGAGACC
ATGGTGCAGCCTGAGGACCTACAGACTCCTATTACCTCTGGAGCTAGACAGGGGAGCGGTGAGTACTTTACTCGGCTCGGCTTGGGTCAACCGGT
TAAGCAGTATTATATGGTGCTTGACACTGGCAGTGACATCAC
TGGCTCAATTTTGCTTATTTCTTCTTTTAATCTCTCTTGTTTCTGTCCCCTGTGTTCTCTCTCGTTCTTTGTCATCTTCTTCACATCCTCACACC
CAAATCTTCGATGTTGCAGCATCCATTGAGAAAACTGTTCAAGTTCTTACTCCTGCTACACAAAGTTTTCAACAAGAAGCAATTCAGAGTGCCCA
TTTTAATTCTTCTTCAATATCTGTATCAATTTATCCTCGTTCAGCTCTTGTTAAGCCCCGCCATAAAGATTATGCAGCTCTCACTCTTTCTCGAC
TTGAACGTGATTCGGCTCGAGTTTCTTCACTCACCATGAAGCTCCACCTCGCGTTAAACAACTTTAATCACTCGGATCTCAAGCCGGTGGAGACC
ATGGTGCAGCCTGAGGACCTACAGACTCCTATTACCTCTGGAGCTAGACAGGGGAGCGGTGAGTACTTTACTCGGCTCGGCTTGGGTCAACCGGT
TAAGCAGTATTATATGGTGCTTGACACTGGCAGTGACATCAC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E287082] | SGN-U576016 | Tomato 200607 | Build 2 | 62 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T98534 [Download][View] | Facility Assigned ID: TPSAX88TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.951 | Expected Error Rate: 0.0076 | Quality Trim Threshold: 14.5 |
Working
