EST details — SGN-E213477
| Search information |
| Request: 213477 | Match: SGN-E213477 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C11335 | Clone name: cLEC-71-D14 |
| ||
| Library Name: cLEC | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E213477 | Length: 774 bp (917 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E213477 [] (trimmed)
CTTGTTTGTGCTTTCTCACTAATTTACTTTTTCATAGATTTTGTTTGAGAAGAAAGAAAATGTTGGCAATTTTCAAGAAAAGTGTGGTTGATCCA
CCAATGGAGCTGCAGAGCCCAGCCTCTTTGCAATCATCAAACAAGGCTGTTTCCCCTGAAGAGACTATGAAGAATTTCTTAGCTTCAAATACCAA
CAATGGGTTTTCTATTGGATTCATGGACAAGGCATTCTTGGCCTATTCCAAACCTCCATCCTCATCAAATGCTCAACAAAGGTTGTTCTGTGGGT
TGAATGACATATACTGCATTTTCTTGGGAAGCTTGAATAACTTATGGGCACTAAACAAGCAGTATGGTCTGTCAAAGGGTACCAATGAGGCCATG
CTTGTGAGTGAAGCATATCGTACCCTTCGTGACAGAGGTCCATTCCCAGCTCATGAGGTTCTCAAGGGACTTGAGGGTAGCTATGGCTTTGTGAT
CTATGATCATAAGGCTGGTAATGTCTTTGTTGCCCTTGGTGCTGATGAAACTGCAAAGATGTTCTGGGGAATAGCATCTGATGGATCTGTCATGA
TCTCTGATAATGTGGATCATATCAAAGGAAGCTGTCTCAAATCATTTGCTCCCTTCCCAACCGGGTGCATGTACCACAGTGAAAGTGGATTGAAG
AGCTTTGAGCATCCAAGTTTCAAGATGAAAGCAATGCCAAGAGTGGATAGTGAAGGAGCCATGTGTGGAGCTTGCTTTTCAAGTGATGTCTACTC
CAAGGTGATAGCAT
CCAATGGAGCTGCAGAGCCCAGCCTCTTTGCAATCATCAAACAAGGCTGTTTCCCCTGAAGAGACTATGAAGAATTTCTTAGCTTCAAATACCAA
CAATGGGTTTTCTATTGGATTCATGGACAAGGCATTCTTGGCCTATTCCAAACCTCCATCCTCATCAAATGCTCAACAAAGGTTGTTCTGTGGGT
TGAATGACATATACTGCATTTTCTTGGGAAGCTTGAATAACTTATGGGCACTAAACAAGCAGTATGGTCTGTCAAAGGGTACCAATGAGGCCATG
CTTGTGAGTGAAGCATATCGTACCCTTCGTGACAGAGGTCCATTCCCAGCTCATGAGGTTCTCAAGGGACTTGAGGGTAGCTATGGCTTTGTGAT
CTATGATCATAAGGCTGGTAATGTCTTTGTTGCCCTTGGTGCTGATGAAACTGCAAAGATGTTCTGGGGAATAGCATCTGATGGATCTGTCATGA
TCTCTGATAATGTGGATCATATCAAAGGAAGCTGTCTCAAATCATTTGCTCCCTTCCCAACCGGGTGCATGTACCACAGTGAAAGTGGATTGAAG
AGCTTTGAGCATCCAAGTTTCAAGATGAAAGCAATGCCAAGAGTGGATAGTGAAGGAGCCATGTGTGGAGCTTGCTTTTCAAGTGATGTCTACTC
CAAGGTGATAGCAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E213477] | SGN-U564627 | Tomato 200607 | Build 2 | 16 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T34928 [Download][View] | Facility Assigned ID: TCAKX19TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.967 | Expected Error Rate: 0.0044 | Quality Trim Threshold: 14.5 |
Working
