| SGN ID: SGN-C16866 | Clone name: cLED-17-N13 |  | Order Clone |
|
| Library Name: cLED | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis
Microarray: Alias clone
SGN-C175824 is on microarray TOM1: SGN-S1-1-3.2.11.9
There is no map position defined on SGN for this EST or others in the same unigene.
| Sequence Id: SGN-E238572 | Length: 681 bp (925 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E238572 [] (trimmed)
CACTAAACCTTTTTTCGGATATCCAGCATCCTCATACTGCGACTTTCGATTTCTAAACACGAGAGTTCTGGACCATCCAACACTCCACCTCATAC
AACATAGTTGGTCTAACTACTACTTTGTACAATTTGTCTTTAAGTTTGGTGGCACCTTCTTATCACACAAGACTCCCCAATTCAGTATTGTGGAC
GGCGAGAGGCGACAAGGGCCTGCCTCGCCACACGGCGAGGCGAGCGGCGAGGCGCTTGCCTTTTTGAATAAAGGCGCCAATTAATACCAAAAATT
AAAAATATTTAACTGCATATTTTGTCCAAAATCTTAATAGCAATAACACATATTAACAAATATTCAATTCAAAAACCAATAGTAGATACTAAAAT
GTCTAAAACTTTAAAGACCAAACAATTCAAAATACAATAAACCAAAACTTTAAAAGTCTATTCTTCTTCAAATTATCCAACCCTTGAGTGTCATA
ATTCCATCCAATGTCCCTCTTTTGCTAGCAACTGCCATTGATTATTAAATTCAATTAATTCGCTATTTAGGAATATTGGAATAAATAATTAGGAA
AATGGAAAGATTTTTTTTTTAATTAACTGCCTATTATTAAAAAAAATTACACAAAGCAGTTAGCAACTAAGCACTGCTTACAGCCTTGCACCAAA
AAAACACAACTGAAAA
[BLAST] [AA Translate]
| SGN-ID: SGN-T53014 [Download][View] |
Facility Assigned ID: TOVCO79TH
|
| Submitter: Koni |
Sequencing Facility: TIGR |
Funding Organization: National Science Foundation
| Processed By: SGN |
Basecalling Software: phred |
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
| Sequence Entropy: 0.951 |
Expected Error Rate: 0.0087 |
Quality Trim Threshold: 12.5 |
