EST details — SGN-E271376
| Search information |
| Request: 271376 | Match: SGN-E271376 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C64361 | Clone name: cLEM-5-O3 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C177978 is on microarray TOM1: SGN-S1-1-1.4.6.10
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177978 [TUS-27-P8] | Trace: SGN-T193052 | EST: SGN-E391726 | Direction: 5' | Facility: INRA |
| Clone: SGN-C177978 [TUS-27-P8] | Trace: SGN-T193298 | EST: SGN-E391972 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E271376 | Length: 491 bp (1029 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E271376 [] (trimmed)
GCTCTCTATTGATTCTAAGTATCCTTGGAACAATTTCTCTGCAGAGTTTGTTTGCCATAGGAATCCCAGGTGCCTTTACTTTGTTTTACATATAT
GAAAAGAAAGAGGAAGAAATAGATCATGTACTTCAAGATATTGTCTTATTTACATGGAAGTTGAAGTCTGATATTTCTGGGAAAATTTTCAGCTC
TACAAAAAAGGACCGATAATAGACAGCAAATTACCTGTTCAAACTTCTTCCTTATCTTGAGAAGCTTTCTTAAGCAGGTTGTTGAAGTTCAAGGA
CTTCACACTTATCCTTGTGTGTAACATATTAATGGGAACCTTGCTGAAAGCCAGTTTTTCTGTCTGATCTGATATCAGGCTGCTGTGTGTCAAGG
CATTGTCTTTTTGTTTGCTCTTCTCATTTCTCTCCGCTTCCCCTCTTTTGCCAATATTACTAGGGTATATTTGGCTCTCGCTGCATTTGGTGTTA
ATGGTTTCGTTCTGGT
GAAAAGAAAGAGGAAGAAATAGATCATGTACTTCAAGATATTGTCTTATTTACATGGAAGTTGAAGTCTGATATTTCTGGGAAAATTTTCAGCTC
TACAAAAAAGGACCGATAATAGACAGCAAATTACCTGTTCAAACTTCTTCCTTATCTTGAGAAGCTTTCTTAAGCAGGTTGTTGAAGTTCAAGGA
CTTCACACTTATCCTTGTGTGTAACATATTAATGGGAACCTTGCTGAAAGCCAGTTTTTCTGTCTGATCTGATATCAGGCTGCTGTGTGTCAAGG
CATTGTCTTTTTGTTTGCTCTTCTCATTTCTCTCCGCTTCCCCTCTTTTGCCAATATTACTAGGGTATATTTGGCTCTCGCTGCATTTGGTGTTA
ATGGTTTCGTTCTGGT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E271376] | SGN-U582115 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T85181 [Download][View] | Facility Assigned ID: TGFAQ86TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.950 | Expected Error Rate: 0.0089 | Quality Trim Threshold: 12.5 |
Working
