EST details — SGN-E302404

Search information 
Request: 302404Match: SGN-E302404
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C91436Clone name: cLEW-27-J12
cartOrder Clone
Library Name: cLEWOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: mixed roots grown under different nutrient and mineral difficiencies
Development Stage: 4-8 weeks

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C192046 [TUS-64-J12] Trace: SGN-T343876 EST: SGN-E543001 Direction: 5' Facility: INRA (MWG)
Clone: SGN-C192046 [TUS-64-J12] Trace: SGN-T349681 EST: SGN-E548806 Direction: 3' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E302404Length: 579 bp (921 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E302404 [] (trimmed) GGTCTTCTCTCCGATAACCGCAACTTTCTCAGAGTCTAACGGAATTTCTCTTTGAAACCCTAATAACAGTTACCTTAGTTGAGTTCTGTATACAA
TGGAAGAGGAAGTCCAAGTGGATGAGAATTTTCCCTTATTCTCCCGGAAAACTAAACCGGCCACAAAAAAACTCGTTCCTGCTCCAACCTCCATT
GAAGAAACCCCAAAGCAGCTTGACAAGGAGACTAACTCTGGTCCAACCCCTAGTTATATCACCTTCTCTGACTTAGGCCTCGCCGGGTGGGCTGT
ACAGACCTGTAATGAGCTGGGCATGAAGAAACCCACTCCTGTACAATATCACTGTATACCCAGAATACTCTCCGGACAGGATGTGTTAGGTTTAG
CTCAGACTGGTAGTGGAAAAACAGCTGCATTTGCATTGCCTATTCTTCATCGTTTAGCTGAAGATCCTTATGGGGTGTCCTGTCTTGTGGTTACT
CCGACACGGGAGCTTGCGTTTCAGCTTGCCGAGCAGTTTCGGGCCCTGGGATCCTGCTTGAATTTGCGGTGTGCTGTGATTGTGGGAGGAATGGA
TATGATAAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E302404] SGN-U584582 Tomato 200607 Build 2 19 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T114987 [Download][View] Facility Assigned ID: TRDED54TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.989 Expected Error Rate: 0.0032 Quality Trim Threshold: 14.5