EST details — SGN-E303860
| Search information |
| Request: 303860 | Match: SGN-E303860 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C94441 | Clone name: cLEX-4-E21 |
| ||
| Library Name: cLEX | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: fruit-set stage/post-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C192155 [TUS-64-O1] | Trace: SGN-T344063 | EST: SGN-E543188 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C192155 [TUS-64-O1] | Trace: SGN-T349712 | EST: SGN-E548837 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E303860 | Length: 589 bp (849 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E303860 [] (trimmed)
GTGTTACCATATGCGGACATGTATTCTGCAACCAATGTGTATCAGATTATTTAACTGGGGAAGATAATACATGTCCTACACCTGGATGCAGAGAA
CAACTTGGTCCTGAGGCTGTTTATTCTAAAGCTGCCCTTAAAAAATGTGTAACAGGTGATGTAAATGGCGATCCTTCCAGCTTGTCTGAATTTGA
TGAGAAATCAATTATGGAAAATGAGTACAGCTCTTCTAAAATAAGAACTGCTATTGAAATTCTTGAGTCATGTTGTAAGTCAAAGGATACCTATT
TAGAATCAGATATCTTGGTGCAATGCAATGGTGATTCATCAAATTTGGGAGAAAGAGATTCAGAAATGCAATCCAAGGGGCCGATAAAGGCCATT
GTCTTCTCTCAGTGGACAGGCATGTTAAACTTGGTTGAGCATGCTTTGAACCAGTCTGGTTTTCGGTATGAGAGGCTGGATGGCACAATGTCTCT
TGCTGCTAGAGACAGAGCTGTCAAAGAGTTCAACACAAATCCTGAGGTGACTGTCATGTTGATGTCACTAAAAGCTGGAAATCTTGGTCTAAATA
TGGTGGCAGCTTCTCATGT
CAACTTGGTCCTGAGGCTGTTTATTCTAAAGCTGCCCTTAAAAAATGTGTAACAGGTGATGTAAATGGCGATCCTTCCAGCTTGTCTGAATTTGA
TGAGAAATCAATTATGGAAAATGAGTACAGCTCTTCTAAAATAAGAACTGCTATTGAAATTCTTGAGTCATGTTGTAAGTCAAAGGATACCTATT
TAGAATCAGATATCTTGGTGCAATGCAATGGTGATTCATCAAATTTGGGAGAAAGAGATTCAGAAATGCAATCCAAGGGGCCGATAAAGGCCATT
GTCTTCTCTCAGTGGACAGGCATGTTAAACTTGGTTGAGCATGCTTTGAACCAGTCTGGTTTTCGGTATGAGAGGCTGGATGGCACAATGTCTCT
TGCTGCTAGAGACAGAGCTGTCAAAGAGTTCAACACAAATCCTGAGGTGACTGTCATGTTGATGTCACTAAAAGCTGGAAATCTTGGTCTAAATA
TGGTGGCAGCTTCTCATGT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E303860] | SGN-U572268 | Tomato 200607 | Build 2 | 8 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T115797 [Download][View] | Facility Assigned ID: TRXAM35TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.955 | Expected Error Rate: 0.0072 | Quality Trim Threshold: 14.5 |
Working
