EST details — SGN-E371508

Search information 
Request: 371508Match: SGN-E371508
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178596Clone name: TUS-29-J2
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178596 is on microarray TOM1 spot ID 1-1-7.2.4.15 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C72258 [cLER-1-K14] Trace: SGN-T91923 EST: SGN-E280369 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E371508Length: 276 bp (885 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E371508 [] (trimmed) AATTTGATGGATTGAGATTTATTGAGACTTTGATTACAGCTCACAGATAAGTTAACAAGAGGGGAAAAAAAAAGAAAGTAATTTTTGACAGCTTT
ATTAGTGAAAATATTATCTGAGGAAAAAATGGAATATATGAAGGTGAAATTGTATGATATTAATTTTGTTTATGGGTTTTGTTTTTGCTTAATAG
GTGTTTAATTAGGCAATTTGATGACTGATTTTTTTTTTTTTTAATTTTAGTTTATGAGTACTATGAATGAATGAAGAGATTGAAGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E371508] SGN-U575480 Tomato 200607 Build 2 8 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T184275 [Download][View] Facility Assigned ID: FA0AAD17DE01RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.837 Expected Error Rate: 0.0049 Quality Trim Threshold: 12.5