EST details — SGN-E395936

Search information 
Request: 395936Match: SGN-E395936
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C174387Clone name: TUS-18-J17
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C174387 is on microarray TOM1 spot ID 1-1-8.2.15.2 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C22981 [cLED-4-C4] Trace: SGN-T49229 EST: SGN-E231460 Direction: 5' Facility: TIGR
Clone: SGN-C174387 [TUS-18-J17] Trace: SGN-T197263 EST: SGN-E395937 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E395936Length: 486 bp (872 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E395936 [] (trimmed) GGGAAGGTCGAAAAACTCCTTTTTACATTACATCCATGGTATAAACCACAATAACTTAAAAGAAAAGTTCTATAGAAACATCAAATGAAAATAAT
TGCCATGATGCCATGGTTCTGTATTAAGTTGACTGTGAAAATTTACAACCCCAAAACTAAAAACAAATATTACTTACTGACTACAACTTAAACTA
CTTAAGCAATATATCCTAAACCCTATCCCAAGAAGAAATCCATGAAATCTATCATTTACATTTTCTAAGCAAAGAATCTACAGAGAATAATCTAA
GTCTCATTCTCATTTGGGTGTAAACCACTAAAATCCAACCCCTGCACAAGGTAACCCATAGCTATAAAAAAAATGAGGATCATATGAATCTTTGA
AGATTTTCTCATAAATCATCTTTTTTAAGTAAGGTCATCTCTTTTTTGGCGGGGCTATGGAACCTAATAACCCGCGCCTCAATTGTATATGCTGG
TAAACCAGTTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E395936] SGN-U569229 Tomato 200607 Build 2 8 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T197262 [Download][View] Facility Assigned ID: FA0AAD6CE09FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.925 Expected Error Rate: 0.0153 Quality Trim Threshold: 14.5