EST details — SGN-E543188
| Search information |
| Request: 543188 | Match: SGN-E543188 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C192155 | Clone name: TUS-64-O1 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C94441 [cLEX-4-E21] | Trace: SGN-T115797 | EST: SGN-E303860 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C192155 [TUS-64-O1] | Trace: SGN-T349712 | EST: SGN-E548837 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E543188 | Length: 704 bp (903 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E543188 [] (trimmed)
AGCAAGTAATTCTAATGACTTGTGTTGCATCCAAAATATCTCCCAGGTGTTAATATATTCTTCCTACATATGAACATTCTGCTAACTGCCCATAA
CAGCCCAAATGCAGATAAAAAAAAGCCCCGCCCCCCTGTATTAGAGATTAAACAGATATCTAAGATCTTCTACAGTTAGTCGACTGGCTGTCCCT
CCACTTTGATCTTCACCAAAAGCAGATGCAACCATATTCCTCTTGTCCTCCTGGAGAGCTATTATTCGATCTTCAACTGTGTCTTTCACAGTTAG
ACGAGACACGGTGACTGCACGAGTTTGTCCTATTCTGTGAGCTCGATCAATAGCCTGATCTTCAGTGGTTGGATTCCACCAAAGGTCCAGAAGAA
TTACATGAGAAGCTGCCACCATATTTAGACCAAGATTTCCAGCTTTTAGTGACATCAACATGACAGTCACCTCAGGATTTGTGTTGAACTCTTTG
ACAGCTCTGTCTCTAGCAGCAAGAGACATTGTGCCATCCAGCCTCTCATACCGAAAACCAGACTGGTTCAAAGCATGCTCAACCAAGTTTAACAT
GCCTGTCCACTGAGAGAAGACAATGGCCTTTATCGGCCCCTTGGATTGCATTTCTGAATCTCTTTCTCCCAAATTTGATGAATCACCATTGCATT
GCACCAAGATATCTGATTCTAAATAGGTATCCTTTGACT
CAGCCCAAATGCAGATAAAAAAAAGCCCCGCCCCCCTGTATTAGAGATTAAACAGATATCTAAGATCTTCTACAGTTAGTCGACTGGCTGTCCCT
CCACTTTGATCTTCACCAAAAGCAGATGCAACCATATTCCTCTTGTCCTCCTGGAGAGCTATTATTCGATCTTCAACTGTGTCTTTCACAGTTAG
ACGAGACACGGTGACTGCACGAGTTTGTCCTATTCTGTGAGCTCGATCAATAGCCTGATCTTCAGTGGTTGGATTCCACCAAAGGTCCAGAAGAA
TTACATGAGAAGCTGCCACCATATTTAGACCAAGATTTCCAGCTTTTAGTGACATCAACATGACAGTCACCTCAGGATTTGTGTTGAACTCTTTG
ACAGCTCTGTCTCTAGCAGCAAGAGACATTGTGCCATCCAGCCTCTCATACCGAAAACCAGACTGGTTCAAAGCATGCTCAACCAAGTTTAACAT
GCCTGTCCACTGAGAGAAGACAATGGCCTTTATCGGCCCCTTGGATTGCATTTCTGAATCTCTTTCTCCCAAATTTGATGAATCACCATTGCATT
GCACCAAGATATCTGATTCTAAATAGGTATCCTTTGACT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E543188] | SGN-U572268 | Tomato 200607 | Build 2 | 8 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T344063 [Download][View] | Facility Assigned ID: TUS64O01_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.962 | Expected Error Rate: 0.0028 | Quality Trim Threshold: 14.5 |
Working
