EST details — SGN-E546617

Search information 
Request: 546617Match: SGN-E546617
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C194151Clone name: TUS-70-B5
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C102883 [cLHT-31-P5] Trace: SGN-T171878 EST: SGN-E359492 Direction: 5' Facility: TIGR
Clone: SGN-C194151 [TUS-70-B5] Trace: SGN-T347491 EST: SGN-E546616 Direction: 3' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E546617Length: 655 bp (877 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E546617 [] (trimmed) GGTTCTTTCTGTTTGTATGACACACGTGGTCTGTCGGATGATTTGAATGAAAATAAGAAAATTGTGGACCGCTGGATGAAAAAGGGGGTTCGTCA
TGGGAAGCTAATAACCAGGGATTCTGATGATGCACATCCGAAGTCTGAAGTTCGCCGAAATAGATACTGTGCCAGTGAGACCAATGTGGTTAATT
GTGTCATATTTGTTGTCAGTGCGGTCCAAATTCTACAATCGATGGACAGCGATGATGAAACAAAAAGGCAACAAACTCGAGCTGTTGCTACAAAT
TTCAACTACCCTCTCTTGTCATTCAAAGATGAAAAACCTATTGTTGTGCTCACACATGGTGATTTACTTTCACTTTTGGATCGTACGCGCATCCG
CATGCATTTGGGACAGCTGCTGGGTATTCATCCCAAGAAACAAATTTTTGATATCCCAGGTGACATCAAGATAAGTTAGCCTGCTAGTACATGAA
TTTGTTTAAGTTGAACAAAACTCTAACCACCCCGAACCCCCGTTCTATTTTTCTCCTTGTGGGCTTGTGTTTTCAGATAGTGATGATTTTGNCAC
TAGGTTGACTATACTCAACATGCTGCGCCATTGTCTCGAGCGTGCTGATAAAAACTTACCCTTCAAAAAAGACTACCTTTTCAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E546617] SGN-U565944 Tomato 200607 Build 2 4 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T347492 [Download][View] Facility Assigned ID: TUS70B05_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.985 Expected Error Rate: 0.0098 Quality Trim Threshold: 14.5