EST details — SGN-E647398
| Search information |
| Request: 647398 | Match: SGN-E647398 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C444228 | Clone name: cccs30w23i18 |
| ||
| Library Name: cccs30w | Organism: Coffea canephora |
Tissue: Endosperm and perisperm
Development Stage: 30 week after pollination
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C444228 [cccs30w23i18] | Trace: SGN-T468091 | EST: SGN-E644372 | Direction: 5' | Facility: Cornell |
| Sequence |
| Sequence Id: SGN-E647398 | Length: 690 bp (1036 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E647398 [] (trimmed)
CAGGTGCAGATGTACTTTCTGATGCTGGACAGCCTAGTGGAGTGAAGTCTGTTTGTCTATATGGAGGAACTTCAAAAGCACCTCAGATATCTTCT
CTAAAGTCGGGCGTGGATATTGTTATTGGAACACCAGGTCGTTTGAAGGATCTAATCGAAATGGGAGTTTGCCAGCTCAATGAGGTTTCTTTTGT
GGTGTTAGATGAAGCTGATCGGATGCTTGACTTGGGTTTCGAACCAGAAGTTCGTGCTATATTGAGCCAGACATGCTCTGCTCGTCAAATGCTAA
TGTTTAGTGCAACATGGCCTCTGCCAGTTCACAAGTTAGCTCAAGAATTCATGGATCCAAATCCTGTTAAGGTAGTTGTTGGGTCTGAAGATTTG
GCTGCCAACCATGATGTCATGCAAATTGTAGAGGTCTTGGATGATAGAGCACGTGATGAACGTTTGACAAATTTGTTGGAGAAATACCATAAATC
TAGAAGGAACAGAGTGCTAGTTTTTGTTCTGTACAAGAAAGAAGCATCTCGAGTTGAGAATATGCTACAGAGAAGGGGATGGAAAGTTGTTTCTA
TAAGTGGTGATAAAGCACAAAATGCCCGTAATCACGCCCTCTCCCTGTTTAAGGAGGGAAGCTCTCCTCTAATGATAGCCACCGATGTGGCTGCT
CGAGGATTANACATTCCTGACGTTG
CTAAAGTCGGGCGTGGATATTGTTATTGGAACACCAGGTCGTTTGAAGGATCTAATCGAAATGGGAGTTTGCCAGCTCAATGAGGTTTCTTTTGT
GGTGTTAGATGAAGCTGATCGGATGCTTGACTTGGGTTTCGAACCAGAAGTTCGTGCTATATTGAGCCAGACATGCTCTGCTCGTCAAATGCTAA
TGTTTAGTGCAACATGGCCTCTGCCAGTTCACAAGTTAGCTCAAGAATTCATGGATCCAAATCCTGTTAAGGTAGTTGTTGGGTCTGAAGATTTG
GCTGCCAACCATGATGTCATGCAAATTGTAGAGGTCTTGGATGATAGAGCACGTGATGAACGTTTGACAAATTTGTTGGAGAAATACCATAAATC
TAGAAGGAACAGAGTGCTAGTTTTTGTTCTGTACAAGAAAGAAGCATCTCGAGTTGAGAATATGCTACAGAGAAGGGGATGGAAAGTTGTTTCTA
TAAGTGGTGATAAAGCACAAAATGCCCGTAATCACGCCCTCTCCCTGTTTAAGGAGGGAAGCTCTCCTCTAATGATAGCCACCGATGTGGCTGCT
CGAGGATTANACATTCCTGACGTTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E647398] | SGN-U619454 | Coffea canephora | Build 3 | 4 ESTs assembled | |
| [SGN-E647398] | SGN-U630152 | Coffee species | Build 1 | 6 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T471117 [Download][View] | Facility Assigned ID: cccs30w23i18_1.i |
| Submitter: None | Sequencing Facility: Cornell |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.000 | Expected Error Rate: 0.0000 | Quality Trim Threshold: 15 |
Working
