EST details — SGN-E690468
| Search information |
| Request: 690468 | Match: SGN-E690468 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C467474 | Clone name: LH_Ea03J10 |
| ||
| Library Name: LH_Ea | Organism: Solanum habrochaites (formerly Lycopersicon hirsutum) |
Tissue: Glandular Trichomes
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C467474 [LH_Ea03J10] | Trace: SGN-T493180 | EST: SGN-E694308 | Direction: 3' | Facility: AGI |
| Sequence |
| Sequence Id: SGN-E690468 | Length: 826 bp (1024 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E690468 [] (trimmed)
TCCGGCGCACACTGACGAGTACTGAGACTAGCGTTTCTCTAGGGTTCCGGCAAGTTATAGGATGGCGTCGGAGGATGTGGTAGGTAAGAGAAGCG
AAAGTGCTGTTACTACAATCGTCAATCTGGCTGAAGAAGCTAAAATGGCGAGCGAAGGTGTTAAAGCTCCGAGTCATGCTGCTATTTTCAGTGTA
TGCAAGTCTCTCGCTGCTGGTGGAATCGCCGGTGGAGTGTCACGCACTGCAGTTGCTCCATTGGAAAGGCTTAAAATTCTGCTCCAGGTTCAGAA
TTCTCACAGTATAAAATACAATGGAACAGTTCAGGGGTTGAAATATATATGGAGAACTGAGGGTCTCCGGGGCATGTTCAAAGGAAATGGTACTA
ATTGTGCCCGCATTGTTCCAAACTCTGCTGTCAAGTTCTTCAGCTATGAGGAAGCATCCAAGGGAATCTTATGGTTTTACCGGCAGCAAACTGGA
AATGAGGATGCTGAACTTACTCCTCTTCTACGCCTTGGTGCTGGAGCATGTGCTGGCATCATTGCAATGTCAGCAACTTACCCAATGGACTTGGT
ACGAGGCCGAATTACTGTCCAGACAGATAAATCTCCTAGTCAGTACAGAGGGATATTTCATGCTCTTAGAACAGTTTTTGTTGAAGAAGGCCCGC
GTGCCCTGTACAAAGGATGGCTCCCTTCTGTAATAGGTGTTATTCCTTATGTAGGTTTAAACTTTGCTGTATATGAATCTTTAAAAGATTGGTTG
GTCAAAACTCGACCATTTGGACTAGCTCAAGACACTGAATTGAGTGTTATGACCAAGCTTGGTTGC
AAAGTGCTGTTACTACAATCGTCAATCTGGCTGAAGAAGCTAAAATGGCGAGCGAAGGTGTTAAAGCTCCGAGTCATGCTGCTATTTTCAGTGTA
TGCAAGTCTCTCGCTGCTGGTGGAATCGCCGGTGGAGTGTCACGCACTGCAGTTGCTCCATTGGAAAGGCTTAAAATTCTGCTCCAGGTTCAGAA
TTCTCACAGTATAAAATACAATGGAACAGTTCAGGGGTTGAAATATATATGGAGAACTGAGGGTCTCCGGGGCATGTTCAAAGGAAATGGTACTA
ATTGTGCCCGCATTGTTCCAAACTCTGCTGTCAAGTTCTTCAGCTATGAGGAAGCATCCAAGGGAATCTTATGGTTTTACCGGCAGCAAACTGGA
AATGAGGATGCTGAACTTACTCCTCTTCTACGCCTTGGTGCTGGAGCATGTGCTGGCATCATTGCAATGTCAGCAACTTACCCAATGGACTTGGT
ACGAGGCCGAATTACTGTCCAGACAGATAAATCTCCTAGTCAGTACAGAGGGATATTTCATGCTCTTAGAACAGTTTTTGTTGAAGAAGGCCCGC
GTGCCCTGTACAAAGGATGGCTCCCTTCTGTAATAGGTGTTATTCCTTATGTAGGTTTAAACTTTGCTGTATATGAATCTTTAAAAGATTGGTTG
GTCAAAACTCGACCATTTGGACTAGCTCAAGACACTGAATTGAGTGTTATGACCAAGCTTGGTTGC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E690468] | SGN-U584102 | Tomato 200607 | Build 2 | 24 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T496870 [Download][View] | Facility Assigned ID: LH_Ea03J10.f |
| Submitter: Eyal Fridman | Sequencing Facility: AGI |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.985 | Expected Error Rate: 0.0068 | Quality Trim Threshold: 14.5 |
Working
