EST details — SGN-E290490
| Search information |
| Request: 290490 | Match: SGN-E290490 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C77163 | Clone name: cLES-20-C17 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C179249 is on microarray TOM1: SGN-S1-1-2.1.2.8
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179249 [TUS-31-E7] | Trace: SGN-T1526 | EST: SGN-E378183 | Direction: 5' | Facility: Giov. Lab |
| Clone: SGN-C179249 [TUS-31-E7] | Trace: SGN-T185108 | EST: SGN-E372651 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179249 [TUS-31-E7] | Trace: SGN-T185109 | EST: SGN-E372652 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E290490 | Length: 538 bp (842 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E290490 [] (trimmed)
CTCGATCATCTTCTCATGATTTTCTCTGACACGGACAAGCAGTTGGTTGAGAGAGCACTTGAAGAATCCGGTGATGATCTAGATTCTGCTATCAA
ACGCCTGAATGAGCTCTGCTTGGGATCTGGTGATAATCTGAGGCCTGTGGCAGGAAGCTCTGGTGCTACACATGAGTTCAGCAGCCAGGTTTTTC
CTCAAGGTGTGGCTACAACTAATGGTGAGACCCCATCTGCAGAGGATTTATCTTCTGCAGAAGTGGTGCATTTGCAGGGTACAGAATGGGTGGAT
CTTTTTGTTGGAGAGATGATGAGTGCATCAAACATAGATGATGCTAAAGCGCGTGCTTCACGAGCTCTGGAGGCTTTTGAGAAGACCATATGTGC
TCGTGCAACAGAGGCAGCCTGCCGTTTCCAGAAGGAGAATATGATGCTCAAGCAGCAGTTAGAAGCTCTTGTACAAGAGAATGCTATTTTCAAGC
GAGCAGTTGCCATCCAGCATGAGCGTCAAAAGGAATTCGAGAATAGAGGGAACGAGTTGAATC
ACGCCTGAATGAGCTCTGCTTGGGATCTGGTGATAATCTGAGGCCTGTGGCAGGAAGCTCTGGTGCTACACATGAGTTCAGCAGCCAGGTTTTTC
CTCAAGGTGTGGCTACAACTAATGGTGAGACCCCATCTGCAGAGGATTTATCTTCTGCAGAAGTGGTGCATTTGCAGGGTACAGAATGGGTGGAT
CTTTTTGTTGGAGAGATGATGAGTGCATCAAACATAGATGATGCTAAAGCGCGTGCTTCACGAGCTCTGGAGGCTTTTGAGAAGACCATATGTGC
TCGTGCAACAGAGGCAGCCTGCCGTTTCCAGAAGGAGAATATGATGCTCAAGCAGCAGTTAGAAGCTCTTGTACAAGAGAATGCTATTTTCAAGC
GAGCAGTTGCCATCCAGCATGAGCGTCAAAAGGAATTCGAGAATAGAGGGAACGAGTTGAATC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E290490] | SGN-U567657 | Tomato 200607 | Build 2 | 25 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T102169 [Download][View] | Facility Assigned ID: TPSCY21TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.961 | Expected Error Rate: 0.0075 | Quality Trim Threshold: 14.5 |
Working
