EST details — SGN-E372652

Search information 
Request: 372652Match: SGN-E372652
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179249Clone name: TUS-31-E7
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179249 is on microarray TOM1 spot ID 1-1-2.1.2.8 [Order] [Tomato Microarray Database]
See unigene SGN-U577253 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C77163 [cLES-20-C17] Trace: SGN-T102169 EST: SGN-E290490 Direction: 5' Facility: TIGR
Clone: SGN-C179249 [TUS-31-E7] Trace: SGN-T1526 EST: SGN-E378183 Direction: 5' Facility: Giov. Lab
Clone: SGN-C179249 [TUS-31-E7] Trace: SGN-T185108 EST: SGN-E372651 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E372652Length: 648 bp (922 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E372652 [] (trimmed) CAGGTTACCTCTGCTGCTGTTGCTATTCCATCTTTCACTGGCCTTAAGGCTGGTGCTTCATCATCTTCCAGAGTTAGCACCGGTGCATCCGCTAA
GGTGGCAGCTGCCCCAGTTGCCAGATTGACTGTGAAGGCGTCTTTGAAAGATGTCGGTGCTGCGGTTGCTGCCACCGCTGTTAGCGCGATGCTTG
CTAGCAATGCCATGGCACTTGAAGTGTTGCTTGGTGGTGATGATGGGAGTCTAGCTTTTATTCCTGGGAACTTCAGCGTTAGTGCTGCTGAGAAA
ATTACATTCAAGAGCAATGCTAGGTTCCCACACACCGTCCCATTTGATGAATATGAAGTCCCAACTGGTGTGGATGCTAGTACCATTTTCATGTC
TGAAGAGGATCTTCTGAATGCTCCAGGAGAGACATACAGTGTCACTTTCAGTGAGAAAGGAACTTACACTTTCTACTGTGCACCTCACCAGAGAA
CTGGAATGGCTGGCAAAGTTACTGTCAACTAACTTTTTTCACACCTCTGGTTTGTATAAGATGATTTGAGTTCCCATCAATTTCAACTTTATCCT
TTTAGTATTGACCTTCTATTTCTGATGCGTAATGAGAACTCAGGATATTAAAGTTGCATATGTATCCATGTAATGTCA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E372652] SGN-U577253 Tomato 200607 Build 2 198 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T185109 [Download][View] Facility Assigned ID: FA0AAD19AC04RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.975 Expected Error Rate: 0.0332 Quality Trim Threshold: 12.5