EST details — SGN-E374509

Search information 
Request: 374509Match: SGN-E374509
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C182014Clone name: TUS-38-H12
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C182014 is on microarray TOM1 spot ID 1-1-5.4.10.12 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C83377 [cLET-24-H14] Trace: SGN-T108675 EST: SGN-E296158 Direction: 5' Facility: TIGR
Clone: SGN-C182014 [TUS-38-H12] Trace: SGN-T187780 EST: SGN-E374510 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E374509Length: 715 bp (929 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E374509 [] (trimmed) ATAATGAGTCATCACGTACATTTTCAGGCTTTGAACCAGCAGAATATTATAATGGTAAGATCAAAACTACATACTGACACGGCTTTCTTTCACAT
TCTCAATAATGCAACCAGAAAGCTAGTCTAGAGGAAAGAAAGATAAACAACAAATGCAGTCAACCAAACACCTGCACTAGCAGTGTATTTCCATC
TAACCTTTAAGCACCAACATATCTTTGTTAAATTGCCCACCAATATGCGACTATGAATGATATATTGGCAATTCGCCTCTAAGATCAGATAACCC
AAAATGCATCATAATAGTTTTAGGAGGAAGACTCGGGAGCTGCTGCTCGTCTTGTACGTTCAGGCGGAGGACCATCTCTTCTTCTTACATATGCT
TTACTCTTGCTTCTTGTTCTGTTAGCCTGTTTGGGTTGGTAAGTAGGATACTGACAAGGAATTATTTCTCCATTGATGTACTTATCTCCTCCATA
GTCCTTGTTCTTCACATCTATATAAGAATCGGGCAGGACCCATAGAACTCCAGGTAGACCCTTAAACTTCTCTGATGTTTCTTCCGAAACAGTGC
ACTGAAATCCAGTGTAAGTGGTAGTACTAAAGGCATACATGTTCTTCTTTGCCTCTTCCATACTTCCAAGAACGGTGGCTAGAGTGTCAAGATAA
GTATCAATCATCTGTTCTCTAGTAGGAGCAGGGTCTTTAGGGAACTCCAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E374509] SGN-U565861 Tomato 200607 Build 2 26 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T187779 [Download][View] Facility Assigned ID: FA0AAD26DD06FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.969 Expected Error Rate: 0.0021 Quality Trim Threshold: 12.5