EST details — SGN-E378183
| Search information |
| Request: 378183 | Match: SGN-E378183 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C179249 | Clone name: TUS-31-E7 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C179249 is on microarray TOM1 spot ID 1-1-2.1.2.8 [Order] [Tomato Microarray Database]
See unigene SGN-U577253 for alternative clones/ESTs which are mapped
| Additional sequencing |
| Clone: SGN-C77163 [cLES-20-C17] | Trace: SGN-T102169 | EST: SGN-E290490 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C179249 [TUS-31-E7] | Trace: SGN-T185108 | EST: SGN-E372651 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179249 [TUS-31-E7] | Trace: SGN-T185109 | EST: SGN-E372652 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E378183 | Length: 645 bp (1206 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E378183 [] (trimmed)
CAGGTTACCTCTGCTGCTGTTGCTATTCCATCTTTCACTGGCCTTAAGGCTGGTGCTTCATCATCTTCCAGAGTTAGCACCGGTGCATCCGCTAA
GGTGGCAGCTGCCCCAGTTGCCAGATTGACTGTGAAGGCGTCTTTGAAAGATGTCGGTGCTGTGGTTGCTGCCACCGCTGTTAGCGCGATGCTTG
CTAGCAATGCCATGGCACTTGAAGTGTTGCTTGGTGGTGATGATGGGAGTCTAGCTTTTATTCCTGGGAACTTCAGCGTTAGTGCTGGTGAGAAA
ATTACATTCAAGAACAATGCAGGGTTCCCACACAACGTCGTATTTGATGAAGATGAAATCCCAGCTGGTGTGGATGCTAGTAAGATTTCCATGTC
TGAAGAGGATCTTCTGAATGCAGCAGGAGAGACATACAGTGTCACTTTGAGTGAGAAAGGAACTTACACTTTCTACTGTGCACCTCACCAGGGAG
CTGGAATGGTTGGCAAAGTTACTGTCAACTAATTTTTTTCACACCTCTGTTTTGTAAAAGTTGATTTGAGTTCCCATCAATTTCAACATTTTCCT
TTTAGTATTGCCCTTCTCTTTTTGAGGTGTAATGAAAACTCAGGAAATTAAAGTTGCATATGTATCCATGTAATG
GGTGGCAGCTGCCCCAGTTGCCAGATTGACTGTGAAGGCGTCTTTGAAAGATGTCGGTGCTGTGGTTGCTGCCACCGCTGTTAGCGCGATGCTTG
CTAGCAATGCCATGGCACTTGAAGTGTTGCTTGGTGGTGATGATGGGAGTCTAGCTTTTATTCCTGGGAACTTCAGCGTTAGTGCTGGTGAGAAA
ATTACATTCAAGAACAATGCAGGGTTCCCACACAACGTCGTATTTGATGAAGATGAAATCCCAGCTGGTGTGGATGCTAGTAAGATTTCCATGTC
TGAAGAGGATCTTCTGAATGCAGCAGGAGAGACATACAGTGTCACTTTGAGTGAGAAAGGAACTTACACTTTCTACTGTGCACCTCACCAGGGAG
CTGGAATGGTTGGCAAAGTTACTGTCAACTAATTTTTTTCACACCTCTGTTTTGTAAAAGTTGATTTGAGTTCCCATCAATTTCAACATTTTCCT
TTTAGTATTGCCCTTCTCTTTTTGAGGTGTAATGAAAACTCAGGAAATTAAAGTTGCATATGTATCCATGTAATG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E378183] | SGN-U577253 | Tomato 200607 | Build 2 | 198 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T1526 [Download][View] | Facility Assigned ID: TUS31E7.ab1 |
| Submitter: Koni | Sequencing Facility: Giov. Lab |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.969 | Expected Error Rate: 0.0002 | Quality Trim Threshold: 12.5 |
Working
