EST details — SGN-E398787

Search information 
Request: 398787Match: SGN-E398787
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C185273Clone name: TUS-46-P7
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185273 is on microarray TOM1 spot ID 1-1-2.4.12.16 [Order] [Tomato Microarray Database]
See unigene SGN-U582049 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C82221 [cLET-1-E23] Trace: SGN-T102359 EST: SGN-E292085 Direction: 3' Facility: TIGR
Clone: SGN-C82221 [cLET-1-E23] Trace: SGN-T102563 EST: SGN-E292289 Direction: 5' Facility: TIGR
Clone: SGN-C185273 [TUS-46-P7] Trace: SGN-T199065 EST: SGN-E397739 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E398787Length: 698 bp (849 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E398787 [] (trimmed) CAAACAAATTCAATTTTTCATATAGACTAATATTAGAATAGGAAATGTACACAAAGTCATAAGCCAAAACATGTCCAACTACTTTTCAATTACAA
AGAACAATTATTGCTAACTAGGAATGGGACTAGCTAGAGACATAGGAGAGTTGTGTACCTAGCATTTATCGTGGGCACGATAACGAGTACACTAG
AGGAGTCCAACAATATTAATGGTTAGCTACATCAATCATTTGACACTTTTTTCTCAATTTAGTAGCCAATTCAGCTAATGCTTTTGTAGAAAAAC
CATCTTCACTTAGCACTTTGGCTGCTGCATCTTTAAGGTCTCTCATTCTACTGCGCACTCCTTTTCCTTCTTCACCTTCCATTAGTCCTTTCACA
ACTTTAGCAATTTCCAATCTTCCCACTATGCCATTTTCTTCATTCACTTTTGGCCTTAGTGCCACTTTTATATCCTCACTTAACATGACCGCGTT
CATTTTTTGTTCCGCATAGAGTGGCCATGCTATAAGTGGTACCCCATGGACTACACTCTCAAGAGTCGAGTTCCATCCACAATGAGTCAAGAATC
CACCCGTCGACTCATGGCTCAATATTCGAGCTTGTGGGGCCCAATTAGGCAACACTAAACCAAACCCTTTGGTCCTTTCCAAGAACCCTTTTGGT
AAAACTCAAGAGGGTTCGTTGAATCTTGGACAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E398787] SGN-U582049 Tomato 200607 Build 2 59 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T200113 [Download][View] Facility Assigned ID: FA0AAD34CH04FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.965 Expected Error Rate: 0.0050 Quality Trim Threshold: 14.5