| arabidopsis/peptide [blastx] | Showing best 0 hits recorded |
|
| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|169589|gb|AAA33847.1| |
score: 330.1 |
e-value: 3.2e-89 |
Identity: 84.43% |
Span: 636bp (82.2%) |
Frame: 3 |
| spliceosomal protein [Solanum tuberosum] |
| Match: gi|2347192|gb|AAC16931.1| |
score: 273.1 |
e-value: 4.7e-72 |
Identity: 68.66% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|2347192|gb|AAC16931.1| putative small nuclear ribonucleoprotein U2B [Arabidopsis thaliana] >gi|27765024|gb|AAO2363... |
| Match: gi|21593001|gb|AAM64950.1| |
score: 270.4 |
e-value: 3e-71 |
Identity: 68.66% |
Span: 636bp (82.2%) |
Frame: 3 |
| putative small nuclear ribonucleoprotein U2B [Arabidopsis thaliana] |
| Match: gi|23296313|gb|AAN13038.1| |
score: 267.3 |
e-value: 2.6e-70 |
Identity: 71.63% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|23296313|gb|AAN13038.1| putative spliceosomal protein (U2B) [Arabidopsis thaliana] >gi|30679892|ref|NP_850936.1| s... |
| Match: gi|30679897|ref|NP_172177.3| |
score: 266.9 |
e-value: 3.4e-70 |
Identity: 71.63% |
Span: 636bp (82.2%) |
Frame: 3 |
| small nuclear ribonucleoprotein U2B, putative / spliceosomal protein, putative [Arabidopsis thaliana] |
| Match: gi|19347861|gb|AAL85989.1| |
score: 265.4 |
e-value: 9.8e-70 |
Identity: 71.16% |
Span: 636bp (82.2%) |
Frame: 3 |
| putative spliceosomal protein (U2B) [Arabidopsis thaliana] |
| Match: gi|8954049|gb|AAF82223.1| |
score: 264.6 |
e-value: 1.7e-69 |
Identity: 67.83% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|8954049|gb|AAF82223.1| Strong similarity to a small nuclear ribonucleoprotein U2B'' - potato from Solanum tuberosu... |
| Match: gi|1050840|emb|CAA90282.1| |
score: 229.2 |
e-value: 7.8e-59 |
Identity: 55.2% |
Span: 636bp (82.2%) |
Frame: 3 |
| U1snRNP-specific protein, U1A [Solanum tuberosum] |
| Match: gi|73991123|ref|XP_857709.1| |
score: 209.1 |
e-value: 8.3e-53 |
Identity: 53.02% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|73991123|ref|XP_857709.1| PREDICTED: similar to U2 small nuclear ribonucleoprotein B isoform 7 [Canis familiaris] |
| Match: gi|1050430|emb|CAA90283.1| |
score: 209.1 |
e-value: 8.3e-53 |
Identity: 54.46% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|1050430|emb|CAA90283.1| U1snRNP-specific protein [Arabidopsis thaliana] >gi|22655484|gb|AAM98334.1| At2g47580/T30B... |
| Match: gi|37748043|gb|AAH59527.1| |
score: 208 |
e-value: 1.8e-52 |
Identity: 53.77% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|37748043|gb|AAH59527.1| Unknown (protein for IMAGE:4201535) [Danio rerio] |
| Match: gi|23956110|ref|NP_067310.1| |
score: 206.8 |
e-value: 4.1e-52 |
Identity: 53.95% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|23956110|ref|NP_067310.1| U2 small nuclear ribonucleoprotein B [Mus musculus] gi|12847289|dbj|BAB27510.1| unnamed ... |
| Match: gi|34897622|ref|NP_910157.1| |
score: 206.8 |
e-value: 4.1e-52 |
Identity: 51.77% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|34897622|ref|NP_910157.1| putative small nuclear ribonucleoprotein U1A [Oryza sativa] gi|14595706|gb|AAK70905.1| p... |
| Match: gi|13446037|emb|CAB38777.2| |
score: 206.1 |
e-value: 7e-52 |
Identity: 53.02% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|13446037|emb|CAB38777.2| SNRPB2 [Homo sapiens] >gi|38149981|ref|NP_937863.1| small nuclear ribonucleoprotein polyp... |
| Match: gi|34858820|ref|XP_342529.1| |
score: 206.1 |
e-value: 7e-52 |
Identity: 53.49% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|34858820|ref|XP_342529.1| similar to U2 small nuclear ribonucleoprotein B [Rattus norvegicus] |
| Match: gi|12850013|dbj|BAB28565.1| |
score: 205.3 |
e-value: 1.2e-51 |
Identity: 53.95% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|12850013|dbj|BAB28565.1| unnamed protein product [Mus musculus] |
| Match: gi|73991129|ref|XP_534338.2| |
score: 205.3 |
e-value: 1.2e-51 |
Identity: 53.02% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|73991129|ref|XP_534338.2| PREDICTED: similar to U2 small nuclear ribonucleoprotein B isoform 1 [Canis familiaris] |
| Match: gi|49257361|gb|AAH72799.1| |
score: 205.3 |
e-value: 1.2e-51 |
Identity: 52.36% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|49257361|gb|AAH72799.1| MGC80122 protein [Xenopus laevis] |
| Match: gi|55732648|emb|CAH93023.1| |
score: 204.5 |
e-value: 2e-51 |
Identity: 52.8% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|55732648|emb|CAH93023.1| hypothetical protein [Pongo pygmaeus] |
| Match: gi|73991125|ref|XP_857753.1| |
score: 204.5 |
e-value: 2e-51 |
Identity: 49.77% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|73991125|ref|XP_857753.1| PREDICTED: similar to U2 small nuclear ribonucleoprotein B isoform 8 [Canis familiaris] |
| Match: gi|73991127|ref|XP_857793.1| |
score: 202.6 |
e-value: 7.8e-51 |
Identity: 52.11% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|73991127|ref|XP_857793.1| PREDICTED: similar to U2 small nuclear ribonucleoprotein B isoform 9 [Canis familiaris] |
| Match: gi|50738734|ref|XP_419331.1| |
score: 202.6 |
e-value: 7.8e-51 |
Identity: 51.4% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|50738734|ref|XP_419331.1| PREDICTED: similar to U2 small nuclear ribonucleoprotein B [Gallus gallus] |
| Match: gi|47211375|emb|CAF89828.1| |
score: 201.8 |
e-value: 1.3e-50 |
Identity: 53.3% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|47211375|emb|CAF89828.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|58331942|ref|NP_001011120.1| |
score: 201.8 |
e-value: 1.3e-50 |
Identity: 52.11% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|58331942|ref|NP_001011120.1| hypothetical protein LOC496533 [Xenopus tropicalis] >gi|54038268|gb|AAH84519.1| Hypot... |
| Match: gi|54035240|gb|AAH84107.1| |
score: 201.4 |
e-value: 1.7e-50 |
Identity: 52.11% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|54035240|gb|AAH84107.1| LOC495019 protein [Xenopus laevis] |
| Match: gi|73953828|ref|XP_536409.2| |
score: 199.9 |
e-value: 5e-50 |
Identity: 52.56% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|73953828|ref|XP_536409.2| PREDICTED: similar to U2 small nuclear ribonucleoprotein B [Canis familiaris] |
| Match: gi|73991119|ref|XP_857629.1| |
score: 199.5 |
e-value: 6.6e-50 |
Identity: 50% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|73991119|ref|XP_857629.1| PREDICTED: similar to U2 small nuclear ribonucleoprotein B isoform 5 [Canis familiaris] |
| Match: gi|76641683|ref|XP_885291.1| |
score: 197.2 |
e-value: 3.3e-49 |
Identity: 50% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|76641683|ref|XP_885291.1| PREDICTED: similar to U2 small nuclear ribonucleoprotein B isoform 3 [Bos taurus] |
| Match: gi|17737284|ref|NP_511045.1| |
score: 196.4 |
e-value: 5.6e-49 |
Identity: 49.06% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|17737284|ref|NP_511045.1| sans fille CG4528-PA [Drosophila melanogaster] gi|1173325|sp|P43332|RU1A_DROME U1 small ... |
| Match: gi|54643726|gb|EAL32469.1| |
score: 194.9 |
e-value: 1.6e-48 |
Identity: 49.53% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|54643726|gb|EAL32469.1| GA18235-PA [Drosophila pseudoobscura] |
| Match: gi|72106084|ref|XP_789234.1| |
score: 193.4 |
e-value: 4.7e-48 |
Identity: 49.14% |
Span: 621bp (80.2%) |
Frame: 3 |
| gi|72106084|ref|XP_789234.1| PREDICTED: similar to U1 small nuclear ribonucleoprotein A (U1 snRNP protein A) (U1A pro... |
| Match: gi|55235062|gb|EAA00418.2| |
score: 191.8 |
e-value: 1.4e-47 |
Identity: 47.64% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|55235062|gb|EAA00418.2| ENSANGP00000019197 [Anopheles gambiae str. PEST] >gi|58394659|ref|XP_320869.2| ENSANGP0000... |
| Match: gi|73991115|ref|XP_857552.1| |
score: 191 |
e-value: 2.3e-47 |
Identity: 45.6% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|73991115|ref|XP_857552.1| PREDICTED: similar to U2 small nuclear ribonucleoprotein B isoform 3 [Canis familiaris] |
| Match: gi|73991121|ref|XP_857667.1| |
score: 190.3 |
e-value: 4e-47 |
Identity: 45.93% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|73991121|ref|XP_857667.1| PREDICTED: similar to U2 small nuclear ribonucleoprotein B isoform 6 [Canis familiaris] |
| Match: gi|73962121|ref|XP_860797.1| |
score: 185.7 |
e-value: 9.8e-46 |
Identity: 45.87% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|73962121|ref|XP_860797.1| PREDICTED: similar to U1 small nuclear ribonucleoprotein A (U1 snRNP protein A) (U1-A) (... |
| Match: gi|73991113|ref|XP_857512.1| |
score: 185.7 |
e-value: 9.8e-46 |
Identity: 45.14% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|73991113|ref|XP_857512.1| PREDICTED: similar to U2 small nuclear ribonucleoprotein B isoform 2 [Canis familiaris] |
| Match: gi|47225009|emb|CAF97424.1| |
score: 184.1 |
e-value: 2.9e-45 |
Identity: 42.69% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|47225009|emb|CAF97424.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|73962125|ref|XP_547687.2| |
score: 182.2 |
e-value: 1.1e-44 |
Identity: 46.26% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|73962125|ref|XP_547687.2| PREDICTED: similar to U1 small nuclear ribonucleoprotein A (U1 snRNP protein A) (U1-A) (... |
| Match: gi|76641686|ref|XP_885348.1| |
score: 181.4 |
e-value: 1.9e-44 |
Identity: 42.21% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|76641686|ref|XP_885348.1| PREDICTED: similar to U1 small nuclear ribonucleoprotein A (U1 snRNP protein A) (U1A pro... |
| Match: gi|73948310|ref|XP_533663.2| |
score: 181.4 |
e-value: 1.9e-44 |
Identity: 42.21% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|73948310|ref|XP_533663.2| PREDICTED: similar to U1 small nuclear ribonucleoprotein A (U1 snRNP protein A) (U1A pro... |
| Match: gi|73962123|ref|XP_850163.1| |
score: 181 |
e-value: 2.4e-44 |
Identity: 45.33% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|73962123|ref|XP_850163.1| PREDICTED: similar to small nuclear ribonucleoprotein polypeptide A isoform 2 [Canis fam... |
| Match: gi|63899161|ref|XP_358059.3| |
score: 180.3 |
e-value: 4.1e-44 |
Identity: 46.26% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|63899161|ref|XP_358059.3| PREDICTED: similar to U2 small nuclear ribonucleoprotein B [Mus musculus] |
| Match: gi|38641409|gb|AAR26269.1| |
score: 180.3 |
e-value: 4.1e-44 |
Identity: 41.83% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|38641409|gb|AAR26269.1| nuclear ribonucleoprotein A [Oryctolagus cuniculus] |
| Match: gi|66525863|ref|XP_393440.2| |
score: 174.5 |
e-value: 2.3e-42 |
Identity: 46.98% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|66525863|ref|XP_393440.2| PREDICTED: similar to ENSANGP00000019197 [Apis mellifera] |
| Match: gi|66806007|ref|XP_636725.1| |
score: 173.7 |
e-value: 3.9e-42 |
Identity: 43.12% |
Span: 630bp (81.4%) |
Frame: 3 |
| gi|66806007|ref|XP_636725.1| hypothetical protein DDB0187919 [Dictyostelium discoideum] >gi|60465122|gb|EAL63221.1| h... |
| Match: gi|63635176|ref|XP_484200.2| |
score: 166.4 |
e-value: 6.2e-40 |
Identity: 39.31% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|63635176|ref|XP_484200.2| PREDICTED: similar to small nuclear RNA [Mus musculus] |
| Match: gi|76496416|gb|ABA43713.1| |
score: 166 |
e-value: 8.1e-40 |
Identity: 49.2% |
Span: 546bp (70.5%) |
Frame: 3 |
| gi|76496416|gb|ABA43713.1| SNF [Bombyx mori] |
| Match: gi|47028317|gb|AAT09091.1| |
score: 162.2 |
e-value: 1.2e-38 |
Identity: 41.51% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|47028317|gb|AAT09091.1| small nuclear ribonucleoprotein [Bigelowiella natans] |
| Match: gi|1280169|gb|AAA98033.1| |
score: 158.7 |
e-value: 1.3e-37 |
Identity: 40.09% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|1280169|gb|AAA98033.1| Rnp (rrm rna binding domain) containing protein 3 [Caenorhabditis elegans] >gi|17541322|ref... |
| Match: gi|63702747|ref|XP_354985.3| |
score: 155.6 |
e-value: 1.1e-36 |
Identity: 39.69% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|63702747|ref|XP_354985.3| PREDICTED: similar to small nuclear RNA [Mus musculus] |
| Match: gi|39585996|emb|CAE68287.1| |
score: 154.1 |
e-value: 3.2e-36 |
Identity: 42.25% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|39585996|emb|CAE68287.1| Hypothetical protein CBG13972 [Caenorhabditis briggsae] |
| Match: gi|39585995|emb|CAE68286.1| |
score: 152.1 |
e-value: 1.2e-35 |
Identity: 36.79% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|39585995|emb|CAE68286.1| Hypothetical protein CBG13971 [Caenorhabditis briggsae] |
| Match: gi|55651110|ref|XP_514523.1| |
score: 147.5 |
e-value: 3e-34 |
Identity: 52.76% |
Span: 480bp (62.0%) |
Frame: 3 |
| gi|55651110|ref|XP_514523.1| PREDICTED: similar to U2 small nuclear ribonucleoprotein B [Pan troglodytes] |
| Match: gi|15055398|gb|AAA98032.2| |
score: 146.4 |
e-value: 6.6e-34 |
Identity: 37.74% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|15055398|gb|AAA98032.2| Rnp (rrm rna binding domain) containing protein 2 [Caenorhabditis elegans] >gi|17541324|re... |
| Match: gi|73989913|ref|XP_850387.1| |
score: 145.6 |
e-value: 1.1e-33 |
Identity: 38.36% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|73989913|ref|XP_850387.1| PREDICTED: similar to small nuclear ribonucleoprotein polypeptide A (predicted) [Canis f... |
| Match: gi|56756134|gb|AAW26245.1| |
score: 142.1 |
e-value: 1.2e-32 |
Identity: 36.16% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|56756134|gb|AAW26245.1| SJCHGC05726 protein [Schistosoma japonicum] |
| Match: gi|3169094|emb|CAA19287.1| |
score: 128.3 |
e-value: 1.9e-28 |
Identity: 33.49% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|3169094|emb|CAA19287.1| SPBC4B4.07c [Schizosaccharomyces pombe] >gi|19113216|ref|NP_596424.1| hypothetical protein... |
| Match: gi|68066442|ref|XP_675204.1| |
score: 122.9 |
e-value: 7.8e-27 |
Identity: 35.51% |
Span: 630bp (81.4%) |
Frame: 3 |
| gi|68066442|ref|XP_675204.1| small nuclear ribonucleoprotein (snRNP), putative [Plasmodium berghei] >gi|56494251|emb|... |
| Match: gi|13096860|gb|AAH03229.1| |
score: 122.5 |
e-value: 1e-26 |
Identity: 68.29% |
Span: 246bp (31.8%) |
Frame: 3 |
| gi|13096860|gb|AAH03229.1| Small nuclear ribonucleoprotein polypeptide A [Mus musculus] >gi|66794539|gb|AAH96648.1| S... |
| Match: gi|31980689|ref|NP_056597.2| |
score: 122.5 |
e-value: 1e-26 |
Identity: 68.29% |
Span: 246bp (31.8%) |
Frame: 3 |
| gi|31980689|ref|NP_056597.2| small nuclear ribonucleoprotein polypeptide A; protein A of the U1 small nuclear RNA; U1... |
| Match: gi|27692318|gb|AAH08311.1| |
score: 122.1 |
e-value: 1.3e-26 |
Identity: 68.29% |
Span: 246bp (31.8%) |
Frame: 3 |
| gi|27692318|gb|AAH08311.1| Similar to small nuclear ribonucleoprotein polypeptide B'' [Homo sapiens] |
| Match: gi|12836810|dbj|BAB23823.1| |
score: 122.1 |
e-value: 1.3e-26 |
Identity: 68.29% |
Span: 246bp (31.8%) |
Frame: 3 |
| gi|12836810|dbj|BAB23823.1| unnamed protein product [Mus musculus] |
| Match: gi|58568325|gb|AAW78984.1| |
score: 122.1 |
e-value: 1.3e-26 |
Identity: 68.29% |
Span: 246bp (31.8%) |
Frame: 3 |
| gi|58568325|gb|AAW78984.1| GekBS138P [Gekko japonicus] |
| Match: gi|73991117|ref|XP_857593.1| |
score: 122.1 |
e-value: 1.3e-26 |
Identity: 68.29% |
Span: 246bp (31.8%) |
Frame: 3 |
| gi|73991117|ref|XP_857593.1| PREDICTED: similar to U2 small nuclear ribonucleoprotein B isoform 4 [Canis familiaris] |
| Match: gi|74354072|gb|AAI02329.1| |
score: 122.1 |
e-value: 1.3e-26 |
Identity: 68.29% |
Span: 246bp (31.8%) |
Frame: 3 |
| gi|74354072|gb|AAI02329.1| Unknown (protein for IMAGE:7951083) [Bos taurus] |
| Match: gi|67515655|ref|XP_657713.1| |
score: 121.3 |
e-value: 2.3e-26 |
Identity: 31% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|67515655|ref|XP_657713.1| hypothetical protein AN0109.2 [Aspergillus nidulans FGSC A4] >gi|40746131|gb|EAA65287.1|... |
| Match: gi|76641681|ref|XP_885269.1| |
score: 120.2 |
e-value: 5.1e-26 |
Identity: 65.85% |
Span: 246bp (31.8%) |
Frame: 3 |
| gi|76641681|ref|XP_885269.1| PREDICTED: similar to small nuclear ribonucleoprotein polypeptide A (predicted) isoform ... |
| Match: gi|56605690|ref|NP_001008304.1| |
score: 120.2 |
e-value: 5.1e-26 |
Identity: 65.85% |
Span: 246bp (31.8%) |
Frame: 3 |
| gi|56605690|ref|NP_001008304.1| small nuclear ribonucleoprotein polypeptide A (predicted) [Rattus norvegicus] >gi|555... |
| Match: gi|4759156|ref|NP_004587.1| |
score: 120.2 |
e-value: 5.1e-26 |
Identity: 65.85% |
Span: 246bp (31.8%) |
Frame: 3 |
| gi|4759156|ref|NP_004587.1| small nuclear ribonucleoprotein polypeptide A [Homo sapiens] gi|134092|sp|P09012|RU1A_HUM... |
| Match: gi|1633231|pdb|1FHT| |
score: 120.2 |
e-value: 5.1e-26 |
Identity: 65.85% |
Span: 246bp (31.8%) |
Frame: 3 |
| gi|1633231|pdb|1FHT| Rna-Binding Domain Of The U1a Spliceosomal Protein U1a117, Nmr, 43 Structures |
| Match: gi|3659938|pdb|1A9N|D |
score: 119 |
e-value: 1.1e-25 |
Identity: 68.75% |
Span: 240bp (31.0%) |
Frame: 3 |
| gi|3659938|pdb|1A9N|D Chain D, U2 B''A'RNA TERNARY COMPLEX >gi|3659937|pdb|1A9N|B Chain B, U2 B''A'RNA TERNARY COMPLEX |
| Match: gi|62857647|ref|NP_001016784.1| |
score: 118.6 |
e-value: 1.5e-25 |
Identity: 63.41% |
Span: 246bp (31.8%) |
Frame: 3 |
| gi|62857647|ref|NP_001016784.1| small nuclear ribonucleoprotein polypeptide A [Xenopus tropicalis] >gi|60618430|gb|AA... |
| Match: gi|39850066|gb|AAH64308.1| |
score: 117.5 |
e-value: 3.3e-25 |
Identity: 63.41% |
Span: 246bp (31.8%) |
Frame: 3 |
| gi|39850066|gb|AAH64308.1| Unknown (protein for MGC:77810) [Danio rerio] >gi|41054443|ref|NP_955965.1| small nuclear ... |
| Match: gi|39971539|ref|XP_367160.1| |
score: 117.1 |
e-value: 4.3e-25 |
Identity: 31.19% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|39971539|ref|XP_367160.1| hypothetical protein MG07085.4 [Magnaporthe grisea 70-15] |
| Match: gi|27924189|gb|AAH44979.1| |
score: 117.1 |
e-value: 4.3e-25 |
Identity: 63.41% |
Span: 246bp (31.8%) |
Frame: 3 |
| gi|27924189|gb|AAH44979.1| Snf-prov protein [Xenopus laevis] |
| Match: gi|65181|emb|CAA41021.1| |
score: 117.1 |
e-value: 4.3e-25 |
Identity: 63.41% |
Span: 246bp (31.8%) |
Frame: 3 |
| gi|65181|emb|CAA41021.1| U1 A protein [Xenopus laevis] >gi|1173326|sp|P45429|SNRPA_XENLA U1 small nuclear ribonucleop... |
| Match: gi|23485600|gb|EAA20485.1| |
score: 117.1 |
e-value: 4.3e-25 |
Identity: 35.1% |
Span: 624bp (80.6%) |
Frame: 3 |
| gi|23485600|gb|EAA20485.1| hypothetical protein [Plasmodium yoelii yoelii] |
| Match: gi|2982060|pdb|1AUD|A |
score: 116.7 |
e-value: 5.6e-25 |
Identity: 63.41% |
Span: 246bp (31.8%) |
Frame: 3 |
| gi|2982060|pdb|1AUD|A Chain A, U1a-Utrrna, Nmr, 31 Structures |
| Match: gi|7546345|pdb|1DZ5|B |
score: 116.7 |
e-value: 5.6e-25 |
Identity: 63.41% |
Span: 246bp (31.8%) |
Frame: 3 |
| gi|7546345|pdb|1DZ5|B Chain B, The Nmr Structure Of The 38kda U1a Protein-Pie Rna Complex Reveals The Basis Of Cooper... |
| Match: gi|49259532|pdb|1VC7|A |
score: 115.5 |
e-value: 1.2e-24 |
Identity: 64.2% |
Span: 243bp (31.4%) |
Frame: 3 |
| gi|49259532|pdb|1VC7|A Chain A, Crystal Structure Of The Hepatitis Delta Virus Gemonic Ribozyme Precursor, With C75u ... |
| Match: gi|33357759|pdb|1OIA|B |
score: 114 |
e-value: 3.6e-24 |
Identity: 68.42% |
Span: 228bp (29.5%) |
Frame: 3 |
| gi|33357759|pdb|1OIA|B Chain B, U1a Rnp Domain 1-95 >gi|33357758|pdb|1OIA|A Chain A, U1a Rnp Domain 1-95 |
| Match: gi|66851094|gb|EAL91420.1| |
score: 112.8 |
e-value: 8.1e-24 |
Identity: 30.26% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|66851094|gb|EAL91420.1| small nuclear ribonucleoprotein [Aspergillus fumigatus Af293] >gi|70997421|ref|XP_753458.1... |
| Match: gi|28949022|pdb|1NU4|B |
score: 111.3 |
e-value: 2.4e-23 |
Identity: 64.94% |
Span: 231bp (29.8%) |
Frame: 3 |
| gi|28949022|pdb|1NU4|B Chain B, U1a Rna Binding Domain At 1.8 Angstrom Resolution Reveals A Pre-Organized C-Terminal ... |
| Match: gi|75765951|pdb|1ZZN|A |
score: 111.3 |
e-value: 2.4e-23 |
Identity: 64.94% |
Span: 231bp (29.8%) |
Frame: 3 |
| gi|75765951|pdb|1ZZN|A Chain A, Crystal Structure Of A Group I IntronTWO EXON COMPLEX THAT Includes All Catalytic Met... |
| Match: gi|68442369|ref|XP_701289.1| |
score: 110.5 |
e-value: 4e-23 |
Identity: 45.64% |
Span: 447bp (57.8%) |
Frame: 3 |
| gi|68442369|ref|XP_701289.1| PREDICTED: hypothetical protein XP_696197 [Danio rerio] |
| Match: gi|57230707|gb|AAW47016.1| |
score: 110.2 |
e-value: 5.2e-23 |
Identity: 33.02% |
Span: 624bp (80.6%) |
Frame: 3 |
| gi|57230707|gb|AAW47016.1| RNA binding protein, putative [Cryptococcus neoformans var. neoformans JEC21] >gi|50254444... |
| Match: gi|39979161|emb|CAE85534.1| |
score: 108.6 |
e-value: 1.5e-22 |
Identity: 30.26% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|39979161|emb|CAE85534.1| related to small nuclear ribonucleoprotein snRNP U1A [Neurospora crassa] >gi|32416524|ref... |
| Match: gi|63592914|ref|XP_356179.3| |
score: 108.6 |
e-value: 1.5e-22 |
Identity: 59.76% |
Span: 246bp (31.8%) |
Frame: 3 |
| gi|63592914|ref|XP_356179.3| PREDICTED: similar to small nuclear ribonucleoprotein polypeptide A (predicted) [Mus mus... |
| Match: gi|42550769|gb|EAA73612.1| |
score: 107.1 |
e-value: 4.4e-22 |
Identity: 30.53% |
Span: 636bp (82.2%) |
Frame: 3 |
| gi|42550769|gb|EAA73612.1| hypothetical protein FG04286.1 [Gibberella zeae PH-1] >gi|46116888|ref|XP_384462.1| hypoth... |
| Match: gi|23613861|ref|NP_704882.1| |
score: 107.1 |
e-value: 4.4e-22 |
Identity: 32.55% |
Span: 627bp (81.0%) |
Frame: 3 |
| gi|23613861|ref|NP_704882.1| small nuclear ribonucleoprotein (snRNP), putative [Plasmodium falciparum 3D7] gi|2350524... |
| Match: gi|39850066|gb|AAH64308.1| |
score: 101.3 |
e-value: 2.4e-20 |
Identity: 47.57% |
Span: 309bp (39.9%) |
Frame: 3 |
| gi|39850066|gb|AAH64308.1| Unknown (protein for MGC:77810) [Danio rerio] >gi|41054443|ref|NP_955965.1| small nuclear ... |
| Match: gi|27924189|gb|AAH44979.1| |
score: 96.67 |
e-value: 6e-19 |
Identity: 45.45% |
Span: 291bp (37.6%) |
Frame: 3 |
| gi|27924189|gb|AAH44979.1| Snf-prov protein [Xenopus laevis] |
| Match: gi|65181|emb|CAA41021.1| |
score: 96.67 |
e-value: 6e-19 |
Identity: 45.45% |
Span: 291bp (37.6%) |
Frame: 3 |
| gi|65181|emb|CAA41021.1| U1 A protein [Xenopus laevis] >gi|1173326|sp|P45429|SNRPA_XENLA U1 small nuclear ribonucleop... |
| Match: gi|62857647|ref|NP_001016784.1| |
score: 96.29 |
e-value: 7.8e-19 |
Identity: 45.45% |
Span: 291bp (37.6%) |
Frame: 3 |
| gi|62857647|ref|NP_001016784.1| small nuclear ribonucleoprotein polypeptide A [Xenopus tropicalis] >gi|60618430|gb|AA... |
| Match: gi|73991117|ref|XP_857593.1| |
score: 94.74 |
e-value: 2.3e-18 |
Identity: 58.44% |
Span: 231bp (29.8%) |
Frame: 3 |
| gi|73991117|ref|XP_857593.1| PREDICTED: similar to U2 small nuclear ribonucleoprotein B isoform 4 [Canis familiaris] |
| Match: gi|56605690|ref|NP_001008304.1| |
score: 93.97 |
e-value: 3.9e-18 |
Identity: 46.39% |
Span: 285bp (36.8%) |
Frame: 3 |
| gi|56605690|ref|NP_001008304.1| small nuclear ribonucleoprotein polypeptide A (predicted) [Rattus norvegicus] >gi|555... |
| Match: gi|13096860|gb|AAH03229.1| |
score: 93.97 |
e-value: 3.9e-18 |
Identity: 46.39% |
Span: 285bp (36.8%) |
Frame: 3 |
| gi|13096860|gb|AAH03229.1| Small nuclear ribonucleoprotein polypeptide A [Mus musculus] >gi|66794539|gb|AAH96648.1| S... |
| Match: gi|4759156|ref|NP_004587.1| |
score: 93.97 |
e-value: 3.9e-18 |
Identity: 46.39% |
Span: 285bp (36.8%) |
Frame: 3 |
| gi|4759156|ref|NP_004587.1| small nuclear ribonucleoprotein polypeptide A [Homo sapiens] gi|134092|sp|P09012|RU1A_HUM... |
| Match: gi|31980689|ref|NP_056597.2| |
score: 93.97 |
e-value: 3.9e-18 |
Identity: 46.39% |
Span: 285bp (36.8%) |
Frame: 3 |
| gi|31980689|ref|NP_056597.2| small nuclear ribonucleoprotein polypeptide A; protein A of the U1 small nuclear RNA; U1... |
| Match: gi|63592914|ref|XP_356179.3| |
score: 89.35 |
e-value: 9.6e-17 |
Identity: 46.53% |
Span: 297bp (38.4%) |
Frame: 3 |
| gi|63592914|ref|XP_356179.3| PREDICTED: similar to small nuclear ribonucleoprotein polypeptide A (predicted) [Mus mus... |
|
| 42 lower scoring hits censored -- only 100 best hits are stored. |
