| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|15289872|dbj|BAB63568.1| |
score: 149.4 |
e-value: 5.7e-35 |
Identity: 86.59% |
Span: 246bp (29.2%) |
Frame: -1 |
| gi|15289872|dbj|BAB63568.1| putative helicase-like transcription factor [Oryza sativa (japonica cultivar-group)] |
| Match: gi|15219872|ref|NP_176309.1| |
score: 147.1 |
e-value: 2.8e-34 |
Identity: 90% |
Span: 240bp (28.5%) |
Frame: -1 |
| gi|15219872|ref|NP_176309.1| SNF2 domain/helicase domain/RING finger domain-containing protein [Arabidopsis thaliana] |
| Match: gi|15220286|ref|NP_172577.1| |
score: 140.2 |
e-value: 3.4e-32 |
Identity: 83.75% |
Span: 240bp (28.5%) |
Frame: -1 |
| gi|15220286|ref|NP_172577.1| SNF2 domain/helicase domain-containing protein [Arabidopsis thaliana] gi|25402644|pir||A... |
| Match: gi|18403061|ref|NP_564568.1| |
score: 139.8 |
e-value: 4.5e-32 |
Identity: 80.49% |
Span: 246bp (29.2%) |
Frame: -1 |
| SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein [Arabidop... |
| Match: gi|25405372|pir||D96540 |
score: 139.8 |
e-value: 4.5e-32 |
Identity: 80.49% |
Span: 246bp (29.2%) |
Frame: -1 |
| gi|25405372|pir||D96540 hypothetical protein F11F12.23 [imported] - Arabidopsis thaliana gi|9454567|gb|AAF87890.1| Si... |
| Match: gi|15231009|ref|NP_188635.1| |
score: 137.5 |
e-value: 2.2e-31 |
Identity: 79.27% |
Span: 246bp (29.2%) |
Frame: -1 |
| SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein [Arabidop... |
| Match: gi|38346829|emb|CAE04252.2| |
score: 131.7 |
e-value: 1.2e-29 |
Identity: 74.39% |
Span: 246bp (29.2%) |
Frame: -1 |
| gi|38346829|emb|CAE04252.2| OSJNBa0089N06.13 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|15228256|ref|NP_188282.1| |
score: 105.1 |
e-value: 1.2e-21 |
Identity: 63.75% |
Span: 219bp (26.0%) |
Frame: -1 |
| gi|15228256|ref|NP_188282.1| SNF2 domain/helicase domain/RING finger domain-containing protein [Arabidopsis thaliana] |
| Match: gi|11994614|dbj|BAB02751.1| |
score: 105.1 |
e-value: 1.2e-21 |
Identity: 63.75% |
Span: 219bp (26.0%) |
Frame: -1 |
| gi|11994614|dbj|BAB02751.1| contains similarity to transcription factors~gene_id:MGL6.6 [Arabidopsis thaliana] |
| Match: gi|25404310|pir||C96637 |
score: 96.29 |
e-value: 5.7e-19 |
Identity: 93.75% |
Span: 144bp (17.1%) |
Frame: -1 |
| gi|25404310|pir||C96637 hypothetical protein F11P17.13 [imported] - Arabidopsis thaliana gi|2443887|gb|AAB71480.1| Si... |
| Match: gi|34904734|ref|NP_913714.1| |
score: 89.74 |
e-value: 5.3e-17 |
Identity: 48.1% |
Span: 237bp (28.1%) |
Frame: -1 |
| gi|34904734|ref|NP_913714.1| helicase-like transcription factor-like protein [Oryza sativa (japonica cultivar-group)]... |
| Match: gi|19113394|ref|NP_596602.1| |
score: 89.35 |
e-value: 7e-17 |
Identity: 51.85% |
Span: 240bp (28.5%) |
Frame: -1 |
| gi|19113394|ref|NP_596602.1| SNF2 family dna repair protein by similarity [Schizosaccharomyces pombe] gi|7492644|pir|... |
| Match: gi|38106692|gb|EAA52966.1| |
score: 86.66 |
e-value: 4.5e-16 |
Identity: 54.79% |
Span: 213bp (25.3%) |
Frame: -1 |
| gi|38106692|gb|EAA52966.1| hypothetical protein MG06094.4 [Magnaporthe grisea 70-15] |
| Match: gi|32416406|ref|XP_328681.1| |
score: 85.5 |
e-value: 1e-15 |
Identity: 50% |
Span: 216bp (25.6%) |
Frame: -1 |
| gi|32416406|ref|XP_328681.1| hypothetical protein [Neurospora crassa] gi|28924256|gb|EAA33409.1| hypothetical protein... |
| Match: gi|32408661|ref|XP_324811.1| |
score: 84.34 |
e-value: 2.2e-15 |
Identity: 51.25% |
Span: 240bp (28.5%) |
Frame: -1 |
| gi|32408661|ref|XP_324811.1| hypothetical protein [Neurospora crassa] gi|28927584|gb|EAA36535.1| hypothetical protein... |
| Match: gi|38109494|gb|EAA55357.1| |
score: 82.8 |
e-value: 6.5e-15 |
Identity: 46.91% |
Span: 243bp (28.8%) |
Frame: -1 |
| gi|38109494|gb|EAA55357.1| hypothetical protein MG07014.4 [Magnaporthe grisea 70-15] |
| Match: gi|34394706|dbj|BAC84051.1| |
score: 82.03 |
e-value: 1.1e-14 |
Identity: 48.15% |
Span: 243bp (28.8%) |
Frame: -1 |
| gi|34394706|dbj|BAC84051.1| putative DNA repair protein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|32404678|ref|XP_322952.1| |
score: 81.65 |
e-value: 1.4e-14 |
Identity: 45.68% |
Span: 243bp (28.8%) |
Frame: -1 |
| gi|32404678|ref|XP_322952.1| hypothetical protein ( (AL451013) probable nucleotide exsicion repair protein RAD16 [Neu... |
| Match: gi|19115158|ref|NP_594246.1| |
score: 81.65 |
e-value: 1.4e-14 |
Identity: 50% |
Span: 240bp (28.5%) |
Frame: -1 |
| gi|19115158|ref|NP_594246.1| helicase; putative DNA repair protein [Schizosaccharomyces pombe] gi|7492537|pir||T37813... |
| Match: gi|6319590|ref|NP_009672.1| |
score: 81.26 |
e-value: 1.9e-14 |
Identity: 47.5% |
Span: 240bp (28.5%) |
Frame: -1 |
| Protein that recognizes and binds damaged DNA in an ATP-dependent manner (with Rad7p) during nucleotide excision repa... |
| Match: gi|172320|gb|AAA34930.1| |
score: 81.26 |
e-value: 1.9e-14 |
Identity: 47.5% |
Span: 240bp (28.5%) |
Frame: -1 |
| excision repair protein [Saccharomyces cerevisiae] |
| Match: gi|19111970|ref|NP_595178.1| |
score: 80.88 |
e-value: 2.5e-14 |
Identity: 46.91% |
Span: 240bp (28.5%) |
Frame: -1 |
| gi|19111970|ref|NP_595178.1| rad16 nucleotide excision repair protein homolog [Schizosaccharomyces pombe] gi|1723497|... |
| Match: gi|28631399|gb|AAO49697.1| |
score: 80.49 |
e-value: 3.2e-14 |
Identity: 48.75% |
Span: 240bp (28.5%) |
Frame: -1 |
| gi|28631399|gb|AAO49697.1| similar to Arabidopsis thaliana (Mouse-ear cress). DNA repair protein RAD5 protein [Dictyo... |
| Match: gi|18310607|ref|NP_562541.1| |
score: 78.95 |
e-value: 9.4e-14 |
Identity: 44.05% |
Span: 246bp (29.2%) |
Frame: -1 |
| gi|18310607|ref|NP_562541.1| SWI/SNF family helicase [Clostridium perfringens] gi|18145288|dbj|BAB81331.1| SWI/SNF fa... |
| Match: gi|14195095|sp|P79051|RH16_SCHPO |
score: 78.57 |
e-value: 1.2e-13 |
Identity: 42.5% |
Span: 240bp (28.5%) |
Frame: -1 |
| gi|14195095|sp|P79051|RH16_SCHPO DNA repair protein rhp16 (RAD16 homolog) |
| Match: gi|19075201|ref|NP_587701.1| |
score: 78.57 |
e-value: 1.2e-13 |
Identity: 42.5% |
Span: 240bp (28.5%) |
Frame: -1 |
| Rad16 homolog Rhp16 [Schizosaccharomyces pombe] >gi3647341|emb|CAA21065.1| Rad16 homolog Rhp16 [Schizosaccharomyces p... |
| Match: gi|23105623|ref|ZP_00092079.1| |
score: 78.18 |
e-value: 1.6e-13 |
Identity: 49.38% |
Span: 243bp (28.8%) |
Frame: -1 |
| gi|23105623|ref|ZP_00092079.1| COG0553: Superfamily II DNA/RNA helicases, SNF2 family [Azotobacter vinelandii] |
| Match: gi|23126141|ref|ZP_00108047.1| |
score: 78.18 |
e-value: 1.6e-13 |
Identity: 49.33% |
Span: 222bp (26.3%) |
Frame: -1 |
| gi|23126141|ref|ZP_00108047.1| COG0553: Superfamily II DNA/RNA helicases, SNF2 family [Nostoc punctiforme] |
| Match: gi|23509180|ref|NP_701848.1| |
score: 77.41 |
e-value: 2.7e-13 |
Identity: 45% |
Span: 240bp (28.5%) |
Frame: -1 |
| gi|23509180|ref|NP_701848.1| DNA repair protein rhp16, putative [Plasmodium falciparum 3D7] gi|23497022|gb|AAN36572.1... |
| Match: gi|23481248|gb|EAA17582.1| |
score: 77.41 |
e-value: 2.7e-13 |
Identity: 46.25% |
Span: 240bp (28.5%) |
Frame: -1 |
| gi|23481248|gb|EAA17582.1| similar nucleotide excision repair proteins-related [Plasmodium yoelii yoelii] |
| Match: gi|17232392|ref|NP_488940.1| |
score: 77.41 |
e-value: 2.7e-13 |
Identity: 49.33% |
Span: 222bp (26.3%) |
Frame: -1 |
| gi|17232392|ref|NP_488940.1| SWI/SNF family helicase [Nostoc sp. PCC 7120] gi|25531834|pir||AD2418 SWI/SNF family hel... |
| Match: gi|15239896|ref|NP_199166.1| |
score: 77.41 |
e-value: 2.7e-13 |
Identity: 48.15% |
Span: 243bp (28.8%) |
Frame: -1 |
| SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein [Arabidop... |
| Match: gi|28211487|ref|NP_782431.1| |
score: 77.41 |
e-value: 2.7e-13 |
Identity: 40.96% |
Span: 246bp (29.2%) |
Frame: -1 |
| gi|28211487|ref|NP_782431.1| SWF/SNF family helicase [Clostridium tetani E88] gi|28203928|gb|AAO36368.1| SWF/SNF fami... |
| Match: gi|32470671|ref|NP_863664.1| |
score: 77.03 |
e-value: 3.6e-13 |
Identity: 56.34% |
Span: 210bp (24.9%) |
Frame: -1 |
| gi|32470671|ref|NP_863664.1| helicase [Pirellula sp.] gi|32442816|emb|CAD71334.1| helicase [Pirellula sp.] |
| Match: gi|6323060|ref|NP_013132.1| |
score: 76.64 |
e-value: 4.7e-13 |
Identity: 44.3% |
Span: 237bp (28.1%) |
Frame: -1 |
| gi|6323060|ref|NP_013132.1| putative ATPase/DNA helicase; Rad5p [Saccharomyces cerevisiae] gi|417587|sp|P32849|RAD5_Y... |
| Match: gi|15217826|ref|NP_171767.1| |
score: 76.64 |
e-value: 4.7e-13 |
Identity: 46.25% |
Span: 240bp (28.5%) |
Frame: -1 |
| DNA repair protein, putative [Arabidopsis thaliana] |
| Match: gi|23099744|ref|NP_693210.1| |
score: 76.64 |
e-value: 4.7e-13 |
Identity: 49.37% |
Span: 237bp (28.1%) |
Frame: -1 |
| gi|23099744|ref|NP_693210.1| helicase [Oceanobacillus iheyensis HTE831] gi|22777974|dbj|BAC14245.1| helicase (swi/snf... |
| Match: gi|23128497|ref|ZP_00110342.1| |
score: 75.87 |
e-value: 8e-13 |
Identity: 48% |
Span: 222bp (26.3%) |
Frame: -1 |
| gi|23128497|ref|ZP_00110342.1| COG0553: Superfamily II DNA/RNA helicases, SNF2 family [Nostoc punctiforme] |
| Match: gi|25406830|pir||D86185 |
score: 75.87 |
e-value: 8e-13 |
Identity: 46.34% |
Span: 240bp (28.5%) |
Frame: -1 |
| gi|25406830|pir||D86185 hypothetical protein [imported] - Arabidopsis thaliana gi|4056415|gb|AAC97989.1| Similar to t... |
| Match: gi|15220993|ref|NP_172004.1| |
score: 75.87 |
e-value: 8e-13 |
Identity: 46.34% |
Span: 240bp (28.5%) |
Frame: -1 |
| SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein [Arabidop... |
| Match: gi|38346175|emb|CAE04093.2| |
score: 75.48 |
e-value: 1e-12 |
Identity: 48.75% |
Span: 240bp (28.5%) |
Frame: -1 |
| gi|38346175|emb|CAE04093.2| OSJNBa0096F01.2 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|23021663|ref|ZP_00061327.1| |
score: 75.48 |
e-value: 1e-12 |
Identity: 54.69% |
Span: 192bp (22.8%) |
Frame: -1 |
| gi|23021663|ref|ZP_00061327.1| COG0553: Superfamily II DNA/RNA helicases, SNF2 family [Clostridium thermocellum ATCC ... |
| Match: gi|23100530|ref|NP_693997.1| |
score: 74.71 |
e-value: 1.8e-12 |
Identity: 43.9% |
Span: 246bp (29.2%) |
Frame: -1 |
| gi|23100530|ref|NP_693997.1| helicase [Oceanobacillus iheyensis HTE831] gi|22778763|dbj|BAC15031.1| helicase (swi/snf... |
| Match: gi|23111644|ref|ZP_00097250.1| |
score: 74.71 |
e-value: 1.8e-12 |
Identity: 43.9% |
Span: 246bp (29.2%) |
Frame: -1 |
| gi|23111644|ref|ZP_00097250.1| COG0553: Superfamily II DNA/RNA helicases, SNF2 family [Desulfitobacterium hafniense] |
| Match: gi|32141133|ref|NP_733524.1| |
score: 74.33 |
e-value: 2.3e-12 |
Identity: 48.78% |
Span: 246bp (29.2%) |
Frame: -1 |
| gi|32141133|ref|NP_733524.1| putative helicase [Streptomyces coelicolor A3(2)] gi|24413742|emb|CAD55164.1| putative h... |
| Match: gi|15674024|ref|NP_268199.1| |
score: 74.33 |
e-value: 2.3e-12 |
Identity: 48.39% |
Span: 186bp (22.1%) |
Frame: -1 |
| gi|15674024|ref|NP_268199.1| SWI/SNF family helicase [Lactococcus lactis subsp. lactis] gi|25402082|pir||B86880 SWI/S... |
| Match: gi|32475836|ref|NP_868830.1| |
score: 73.94 |
e-value: 3e-12 |
Identity: 47.37% |
Span: 228bp (27.0%) |
Frame: -1 |
| gi|32475836|ref|NP_868830.1| probable swi/snf family helicase 2 [Pirellula sp.] gi|32446379|emb|CAD76207.1| probable ... |
| Match: gi|21224583|ref|NP_630362.1| |
score: 73.56 |
e-value: 3.9e-12 |
Identity: 47.56% |
Span: 246bp (29.2%) |
Frame: -1 |
| gi|21224583|ref|NP_630362.1| putative helicase [Streptomyces coelicolor A3(2)] gi|6273667|emb|CAB60181.1| putative he... |
| Match: gi|26988870|ref|NP_744295.1| |
score: 73.56 |
e-value: 3.9e-12 |
Identity: 47.5% |
Span: 240bp (28.5%) |
Frame: -1 |
| gi|26988870|ref|NP_744295.1| helicase, SNF2/RAD54 family [Pseudomonas putida KT2440] gi|24983677|gb|AAN67759.1| helic... |
| Match: gi|32527188|gb|AAP85938.1| |
score: 73.17 |
e-value: 5.2e-12 |
Identity: 41.98% |
Span: 243bp (28.8%) |
Frame: -1 |
| gi|32527188|gb|AAP85938.1| putative helicase, superfamily II [Ralstonia eutropha] |
| Match: gi|22992146|ref|ZP_00036810.1| |
score: 72.79 |
e-value: 6.7e-12 |
Identity: 43.9% |
Span: 246bp (29.2%) |
Frame: -1 |
| gi|22992146|ref|ZP_00036810.1| COG0553: Superfamily II DNA/RNA helicases, SNF2 family [Enterococcus faecium] |
| Match: gi|22991297|ref|ZP_00036033.1| |
score: 72.79 |
e-value: 6.7e-12 |
Identity: 43.9% |
Span: 246bp (29.2%) |
Frame: -1 |
| gi|22991297|ref|ZP_00036033.1| COG0553: Superfamily II DNA/RNA helicases, SNF2 family [Enterococcus faecium] |
| Match: gi|16803684|ref|NP_465169.1| |
score: 72.79 |
e-value: 6.7e-12 |
Identity: 44.05% |
Span: 246bp (29.2%) |
Frame: -1 |
| gi|16803684|ref|NP_465169.1| similar to SNF2-type helicase [Listeria monocytogenes EGD-e] gi|25514931|pir||AD1280 SNF... |
| Match: gi|15242960|ref|NP_197667.1| |
score: 72.4 |
e-value: 8.8e-12 |
Identity: 43.59% |
Span: 234bp (27.8%) |
Frame: -1 |
| RAD5; ATP binding / ATP-dependent helicase/ DNA binding / helicase/ hydrolase, acting on acid anhydrides, in phosphor... |
| Match: gi|26554357|ref|NP_758291.1| |
score: 72.4 |
e-value: 8.8e-12 |
Identity: 43.42% |
Span: 228bp (27.0%) |
Frame: -1 |
| gi|26554357|ref|NP_758291.1| helicase with SNF2 domain [Mycoplasma penetrans] gi|26454367|dbj|BAC44695.1| helicase wi... |
| Match: gi|29828520|ref|NP_823154.1| |
score: 72.4 |
e-value: 8.8e-12 |
Identity: 47.56% |
Span: 246bp (29.2%) |
Frame: -1 |
| gi|29828520|ref|NP_823154.1| putative SNF2/RAD54 family helicase [Streptomyces avermitilis MA-4680] gi|29605624|dbj|B... |
| Match: gi|25462850|pir||T52472 |
score: 72.4 |
e-value: 8.8e-12 |
Identity: 40% |
Span: 240bp (28.5%) |
Frame: -1 |
| gi|25462850|pir||T52472 RAD16 nucleotide excision repair protein homolog Rhp16 - fission yeast (Schizosaccharomyces p... |
| Match: gi|23053993|ref|ZP_00080172.1| |
score: 72.02 |
e-value: 1.1e-11 |
Identity: 43.04% |
Span: 237bp (28.1%) |
Frame: -1 |
| gi|23053993|ref|ZP_00080172.1| COG0553: Superfamily II DNA/RNA helicases, SNF2 family [Geobacter metallireducens] |
| Match: gi|15806278|ref|NP_294983.1| |
score: 72.02 |
e-value: 1.1e-11 |
Identity: 47.5% |
Span: 240bp (28.5%) |
Frame: -1 |
| gi|15806278|ref|NP_294983.1| DNA helicase, SNF2/RAD54 family [Deinococcus radiodurans] gi|7471820|pir||H75417 DNA hel... |
| Match: gi|10178052|dbj|BAB11535.1| |
score: 72.02 |
e-value: 1.1e-11 |
Identity: 40.24% |
Span: 246bp (29.2%) |
Frame: -1 |
| gi|10178052|dbj|BAB11535.1| helicase-like transcription factor-like protein [Arabidopsis thaliana] |
| Match: gi|16800753|ref|NP_471021.1| |
score: 72.02 |
e-value: 1.1e-11 |
Identity: 44.05% |
Span: 246bp (29.2%) |
Frame: -1 |
| gi|16800753|ref|NP_471021.1| similar to SNF2-type helicase [Listeria innocua] gi|25515200|pir||AD1643 SNF2-type helic... |
| Match: gi|22326612|ref|NP_196132.2| |
score: 72.02 |
e-value: 1.1e-11 |
Identity: 40.24% |
Span: 246bp (29.2%) |
Frame: -1 |
| SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein [Arabidop... |
| Match: gi|15901369|ref|NP_345973.1| |
score: 72.02 |
e-value: 1.1e-11 |
Identity: 45.35% |
Span: 258bp (30.6%) |
Frame: -1 |
| gi|15901369|ref|NP_345973.1| Snf2 family protein [Streptococcus pneumoniae TIGR4] gi|25389182|pir||D95177 Snf2 family... |
| Match: gi|25011706|ref|NP_736101.1| |
score: 72.02 |
e-value: 1.1e-11 |
Identity: 40.24% |
Span: 246bp (29.2%) |
Frame: -1 |
| gi|25011706|ref|NP_736101.1| Unknown [Streptococcus agalactiae NEM316] gi|24413246|emb|CAD47325.1| Unknown [Streptoco... |
| Match: gi|22537758|ref|NP_688609.1| |
score: 72.02 |
e-value: 1.1e-11 |
Identity: 40.24% |
Span: 246bp (29.2%) |
Frame: -1 |
| gi|22537758|ref|NP_688609.1| Snf2 family protein [Streptococcus agalactiae 2603V/R] gi|22534649|gb|AAN00482.1| Snf2 f... |
| Match: gi|15903418|ref|NP_358968.1| |
score: 72.02 |
e-value: 1.1e-11 |
Identity: 45.35% |
Span: 258bp (30.6%) |
Frame: -1 |
| gi|15903418|ref|NP_358968.1| SWF/SNF family ATP-dependent RNA helicase [Streptococcus pneumoniae R6] gi|25509020|pir|... |
| Match: gi|15896547|ref|NP_349896.1| |
score: 71.63 |
e-value: 1.5e-11 |
Identity: 43.9% |
Span: 243bp (28.8%) |
Frame: -1 |
| gi|15896547|ref|NP_349896.1| Superfamily II DNA/RNA helicases, SNF2 family [Clostridium acetobutylicum] gi|25496173|p... |
| Match: gi|24380105|ref|NP_722060.1| |
score: 71.63 |
e-value: 1.5e-11 |
Identity: 40.24% |
Span: 246bp (29.2%) |
Frame: -1 |
| gi|24380105|ref|NP_722060.1| putative SNF helicase [Streptococcus mutans UA159] gi|24378101|gb|AAN59366.1| putative S... |
| Match: gi|3702846|gb|AAC64044.1| |
score: 71.63 |
e-value: 1.5e-11 |
Identity: 42.68% |
Span: 246bp (29.2%) |
Frame: -1 |
| gi|3702846|gb|AAC64044.1| RNA polymerase II termination factor [Homo sapiens] |
| Match: gi|1655930|gb|AAC18656.1| |
score: 71.25 |
e-value: 2e-11 |
Identity: 37.8% |
Span: 246bp (29.2%) |
Frame: -1 |
| gi|1655930|gb|AAC18656.1| RUSH-1alpha [Oryctolagus cuniculus] |
| Match: gi|19745454|ref|NP_606590.1| |
score: 71.25 |
e-value: 2e-11 |
Identity: 42.86% |
Span: 231bp (27.4%) |
Frame: -1 |
| gi|19745454|ref|NP_606590.1| putative SNF helicase [Streptococcus pyogenes MGAS8232] gi|19747568|gb|AAL97089.1| putat... |
| Match: gi|21909786|ref|NP_664054.1| |
score: 71.25 |
e-value: 2e-11 |
Identity: 42.86% |
Span: 231bp (27.4%) |
Frame: -1 |
| gi|21909786|ref|NP_664054.1| putative SNF helicase [Streptococcus pyogenes MGAS315] gi|28896521|ref|NP_802871.1| puta... |
| Match: gi|15674499|ref|NP_268673.1| |
score: 71.25 |
e-value: 2e-11 |
Identity: 42.86% |
Span: 231bp (27.4%) |
Frame: -1 |
| gi|15674499|ref|NP_268673.1| putative SNF helicase [Streptococcus pyogenes] gi|13621600|gb|AAK33394.1| putative SNF h... |
| Match: gi|25020799|ref|XP_207781.1| |
score: 70.86 |
e-value: 2.6e-11 |
Identity: 42.68% |
Span: 246bp (29.2%) |
Frame: -1 |
| gi|25020799|ref|XP_207781.1| similar to RNA polymerase II termination factor [Mus musculus] |
| Match: gi|20875035|ref|XP_131118.1| |
score: 70.86 |
e-value: 2.6e-11 |
Identity: 42.68% |
Span: 246bp (29.2%) |
Frame: -1 |
| gi|20875035|ref|XP_131118.1| transcription termination factor, RNA polymerase II [Mus musculus] |
| Match: gi|27882409|gb|AAH44659.1| |
score: 70.86 |
e-value: 2.6e-11 |
Identity: 51.67% |
Span: 180bp (21.4%) |
Frame: -1 |
| Helicase-like transcription factor [Homo sapiens] >gi119599297|gb|EAW78891.1| SWI/SNF related, matrix associated, act... |
| Match: gi|19704495|ref|NP_604057.1| |
score: 70.86 |
e-value: 2.6e-11 |
Identity: 48.78% |
Span: 246bp (29.2%) |
Frame: -1 |
| gi|19704495|ref|NP_604057.1| SWF/SNF family helicase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|1971476... |
| Match: gi|531196|gb|AAA67436.1| |
score: 70.86 |
e-value: 2.6e-11 |
Identity: 51.67% |
Span: 180bp (21.4%) |
Frame: -1 |
| ATPase [Homo sapiens] |
| Match: gi|16943790|emb|CAD10805.1| |
score: 70.86 |
e-value: 2.6e-11 |
Identity: 51.67% |
Span: 180bp (21.4%) |
Frame: -1 |
| gi|16943790|emb|CAD10805.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, ... |
| Match: gi|21071052|ref|NP_003062.2| |
score: 70.86 |
e-value: 2.6e-11 |
Identity: 51.67% |
Span: 180bp (21.4%) |
Frame: -1 |
| gi|21071052|ref|NP_003062.2| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a3; SNF2-like 3... |
| Match: gi|1082438|pir||S49618 |
score: 70.86 |
e-value: 2.6e-11 |
Identity: 51.67% |
Span: 180bp (21.4%) |
Frame: -1 |
| gi|1082438|pir||S49618 helicase-like transcription factor - human gi|575251|emb|CAA86571.1| helicase-like transcripti... |
| Match: gi|1658307|emb|CAA86572.1| |
score: 70.86 |
e-value: 2.6e-11 |
Identity: 51.67% |
Span: 180bp (21.4%) |
Frame: -1 |
| gi|1658307|emb|CAA86572.1| helicase-like transcription factor [Homo sapiens] |
| Match: gi|29828134|ref|NP_822768.1| |
score: 70.86 |
e-value: 2.6e-11 |
Identity: 47.56% |
Span: 246bp (29.2%) |
Frame: -1 |
| gi|29828134|ref|NP_822768.1| putative SNF2/RAD54 family helicase [Streptomyces avermitilis MA-4680] gi|29605236|dbj|B... |
| Match: gi|34859664|ref|XP_215670.2| |
score: 70.86 |
e-value: 2.6e-11 |
Identity: 42.68% |
Span: 246bp (29.2%) |
Frame: -1 |
| gi|34859664|ref|XP_215670.2| similar to RNA polymerase II termination factor [Rattus norvegicus] |
| Match: gi|15896682|ref|NP_350031.1| |
score: 70.48 |
e-value: 3.3e-11 |
Identity: 43.21% |
Span: 240bp (28.5%) |
Frame: -1 |
| gi|15896682|ref|NP_350031.1| DNA/RNA helicase, SNF2 [Clostridium acetobutylicum] gi|25501708|pir||H97322 DNA/RNA heli... |
| Match: gi|22984722|ref|ZP_00029860.1| |
score: 70.48 |
e-value: 3.3e-11 |
Identity: 41.25% |
Span: 240bp (28.5%) |
Frame: -1 |
| gi|22984722|ref|ZP_00029860.1| COG0553: Superfamily II DNA/RNA helicases, SNF2 family [Burkholderia fungorum] |
| Match: gi|22966512|ref|ZP_00014108.1| |
score: 70.48 |
e-value: 3.3e-11 |
Identity: 48.05% |
Span: 228bp (27.0%) |
Frame: -1 |
| gi|22966512|ref|ZP_00014108.1| COG0553: Superfamily II DNA/RNA helicases, SNF2 family [Rhodospirillum rubrum] |
| Match: gi|31544906|ref|NP_853484.1| |
score: 70.48 |
e-value: 3.3e-11 |
Identity: 42.5% |
Span: 240bp (28.5%) |
Frame: -1 |
| gi|31544906|ref|NP_853484.1| HepA/SNF2 [Mycoplasma gallisepticum R] gi|31541753|gb|AAP57052.1| HepA/SNF2 [Mycoplasma ... |
| Match: gi|34855513|ref|XP_215728.2| |
score: 70.48 |
e-value: 3.3e-11 |
Identity: 44.29% |
Span: 210bp (24.9%) |
Frame: -1 |
| gi|34855513|ref|XP_215728.2| similar to transcription factor [Rattus norvegicus] |
| Match: gi|29377168|ref|NP_816322.1| |
score: 70.48 |
e-value: 3.3e-11 |
Identity: 41.46% |
Span: 246bp (29.2%) |
Frame: -1 |
| gi|29377168|ref|NP_816322.1| Snf2 family protein [Enterococcus faecalis V583] gi|29344634|gb|AAO82392.1| Snf2 family ... |
| Match: gi|22980467|ref|ZP_00026172.1| |
score: 70.09 |
e-value: 4.4e-11 |
Identity: 57.41% |
Span: 162bp (19.2%) |
Frame: -1 |
| gi|22980467|ref|ZP_00026172.1| COG0553: Superfamily II DNA/RNA helicases, SNF2 family [Ralstonia metallidurans] |
| Match: gi|15618758|ref|NP_225044.1| |
score: 69.71 |
e-value: 5.7e-11 |
Identity: 40.24% |
Span: 246bp (29.2%) |
Frame: -1 |
| gi|15618758|ref|NP_225044.1| SWI/SNF family helicase_2 [Chlamydophila pneumoniae CWL029] gi|16752190|ref|NP_445557.1|... |
| Match: gi|29840673|ref|NP_829779.1| |
score: 69.71 |
e-value: 5.7e-11 |
Identity: 40.24% |
Span: 246bp (29.2%) |
Frame: -1 |
| gi|29840673|ref|NP_829779.1| helicase, Snf2 family [Chlamydophila caviae GPIC] gi|29835023|gb|AAP05657.1| helicase, S... |
| Match: gi|15836382|ref|NP_300906.1| |
score: 69.71 |
e-value: 5.7e-11 |
Identity: 40.24% |
Span: 246bp (29.2%) |
Frame: -1 |
| gi|15836382|ref|NP_300906.1| SWI/SNF family helicase_2 [Chlamydophila pneumoniae J138] gi|25404010|pir||G86596 SWI/SN... |
| Match: gi|19113739|ref|NP_592827.1| |
score: 69.71 |
e-value: 5.7e-11 |
Identity: 43.21% |
Span: 243bp (28.8%) |
Frame: -1 |
| gi|19113739|ref|NP_592827.1| dna repair protein rad8, helicase [Schizosaccharomyces pombe] gi|871545|emb|CAA89964.1| ... |
| Match: gi|15896248|ref|NP_349597.1| |
score: 69.71 |
e-value: 5.7e-11 |
Identity: 40% |
Span: 225bp (26.7%) |
Frame: -1 |
| gi|15896248|ref|NP_349597.1| Superfamily II DNA/RNA helicase, SNF2 family [Clostridium acetobutylicum] gi|25499968|pi... |
| Match: gi|548669|sp|P36607|RAD8_SCHPO |
score: 69.71 |
e-value: 5.7e-11 |
Identity: 43.21% |
Span: 243bp (28.8%) |
Frame: -1 |
| gi|548669|sp|P36607|RAD8_SCHPO DNA repair protein rad8 gi|542223|pir||S41478 DNA repair protein rad8 - fission yeast ... |
| Match: gi|34785644|gb|AAH57116.1| |
score: 69.32 |
e-value: 7.4e-11 |
Identity: 42.86% |
Span: 210bp (24.9%) |
Frame: -1 |
| gi|34785644|gb|AAH57116.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, m... |
| Match: gi|23060669|ref|ZP_00085560.1| |
score: 69.32 |
e-value: 7.4e-11 |
Identity: 42.5% |
Span: 240bp (28.5%) |
Frame: -1 |
| gi|23060669|ref|ZP_00085560.1| COG0553: Superfamily II DNA/RNA helicases, SNF2 family [Pseudomonas fluorescens PfO-1] |
| Match: gi|13507759|ref|NP_109708.1| |
score: 69.32 |
e-value: 7.4e-11 |
Identity: 43.21% |
Span: 243bp (28.8%) |
Frame: -1 |
| gi|13507759|ref|NP_109708.1| similar to helicases [Mycoplasma pneumoniae] gi|2493354|sp|P75093|Y018_MYCPN Hypothetica... |
|
| 150 lower scoring hits censored -- only 100 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 42 hits recorded |
| Match: At1g61140.1 |
score: 147.1 |
e-value: 9.6e-36 |
Identity: 90% |
Span: 240bp (28.5%) |
Frame: -1 |
| At1g61140.1 68408.m06314 SNF2 domain/helicase domain/RING finger domain-containing protein similar to ATPase [Homo sa... |
| Match: At1g11100.1 |
score: 140.2 |
e-value: 1.2e-33 |
Identity: 83.75% |
Span: 240bp (28.5%) |
Frame: -1 |
| At1g11100.1 68408.m01145 SNF2 domain/helicase domain-containing protein similar to RUSH-1alpha [Oryctolagus cuniculus... |
| Match: At1g50410.1 |
score: 139.8 |
e-value: 1.5e-33 |
Identity: 80.49% |
Span: 246bp (29.2%) |
Frame: -1 |
| At1g50410.1 68408.m05178 SNF2 domain/helicase domain/RING finger domain-containing protein similar to transcription f... |
| Match: At3g20010.1 |
score: 137.5 |
e-value: 7.6e-33 |
Identity: 79.27% |
Span: 246bp (29.2%) |
Frame: -1 |
| At3g20010.1 68410.m02290 SNF2 domain/helicase domain/RING finger domain-containing protein similar to transcription f... |
| Match: At3g16600.1 |
score: 105.1 |
e-value: 4.2e-23 |
Identity: 63.75% |
Span: 219bp (26.0%) |
Frame: -1 |
| At3g16600.1 68410.m01910 SNF2 domain/helicase domain/RING finger domain-containing protein similar to SP|P31244 DNA r... |
| Match: At5g43530.1 |
score: 77.41 |
e-value: 9.3e-15 |
Identity: 48.15% |
Span: 243bp (28.8%) |
Frame: -1 |
| At5g43530.1 68412.m04798 SNF2 domain/helicase domain/RING finger domain-containing protein similar to SP|P36607 DNA r... |
| Match: At1g02670.1 |
score: 76.64 |
e-value: 1.6e-14 |
Identity: 46.25% |
Span: 240bp (28.5%) |
Frame: -1 |
| At1g02670.1 68408.m00199 DNA repair protein, putative similar to SP|P79051 DNA repair protein rhp16 (RAD16 homolog) {... |
| Match: At1g05120.1 |
score: 75.87 |
e-value: 2.7e-14 |
Identity: 46.34% |
Span: 240bp (28.5%) |
Frame: -1 |
| At1g05120.1 68408.m00467 SNF2 domain/helicase domain/RING finger domain-containing protein similar to SP|P79051 DNA r... |
| Match: At5g22750.1 |
score: 72.4 |
e-value: 3e-13 |
Identity: 43.59% |
Span: 234bp (27.8%) |
Frame: -1 |
| At5g22750.1 68412.m02437 SNF2 domain/helicase domain/RING finger domain-containing protein similar to SP|P36607 DNA r... |
| Match: At5g05130.1 |
score: 72.02 |
e-value: 3.9e-13 |
Identity: 40.24% |
Span: 246bp (29.2%) |
Frame: -1 |
| At5g05130.1 68412.m00503 SNF2 domain/helicase domain/RING finger domain-containing protein similar to transcription f... |
| Match: At2g40770.1 |
score: 58.15 |
e-value: 5.9e-09 |
Identity: 40% |
Span: 240bp (28.5%) |
Frame: -1 |
| At2g40770.1 68409.m04559 SNF2 domain/helicase domain/RING finger domain-containing protein low similarity to SP|P3660... |
| Match: At3g57300.1 |
score: 57.38 |
e-value: 1e-08 |
Identity: 52.94% |
Span: 153bp (18.1%) |
Frame: -1 |
| At3g57300.1 68410.m05893 transcriptional activator, putative similar to transcriptional activator SRCAP [Homo sapiens... |
| Match: At5g66750.1 |
score: 56.61 |
e-value: 1.7e-08 |
Identity: 41.67% |
Span: 240bp (28.5%) |
Frame: -1 |
| At5g66750.1 68412.m07613 SNF2 domain/helicase domain-containing protein similar to proliferation-associated SNF2-like... |
| Match: At5g63950.1 |
score: 55.84 |
e-value: 2.9e-08 |
Identity: 39.76% |
Span: 246bp (29.2%) |
Frame: -1 |
| At5g63950.1 68412.m07265 SNF2domain/helicase domain-containing protein low similarity to SP|Q03468 Excision repair pr... |
| Match: At2g02090.1 |
score: 54.68 |
e-value: 6.5e-08 |
Identity: 47.06% |
Span: 153bp (18.1%) |
Frame: -1 |
| At2g02090.1 68409.m00125 SNF2 domain/helicase domain-containing protein similar to transcriptional activator SRCAP [H... |
| Match: At2g25170.1 |
score: 53.14 |
e-value: 1.9e-07 |
Identity: 32.97% |
Span: 273bp (32.4%) |
Frame: -1 |
| At2g25170.1 68409.m02724 chromatin remodeling factor CHD3 (PICKLE) identical to chromatin remodeling factor CHD3 [Ara... |
| Match: At3g12810.1 |
score: 52.76 |
e-value: 2.5e-07 |
Identity: 48.08% |
Span: 156bp (18.5%) |
Frame: -1 |
| At3g12810.1 68410.m01433 SNF2 domain/helicase domain-containing protein similar to transcriptional activator SRCAP [H... |
| Match: At3g24340.1 |
score: 52.37 |
e-value: 3.2e-07 |
Identity: 45.45% |
Span: 189bp (22.4%) |
Frame: -1 |
| At3g24340.1 68410.m02789 SNF2domain/helicase domain-containing protein similar to SP|P41410 DNA repair protein rhp54 ... |
| Match: At5g44800.1 |
score: 51.22 |
e-value: 7.2e-07 |
Identity: 49.02% |
Span: 153bp (18.1%) |
Frame: -1 |
| At5g44800.1 68412.m04950 chromodomain-helicase-DNA-binding (CHD) protein family similar to chromatin remodeling facto... |
| Match: At2g28290.2 |
score: 49.29 |
e-value: 2.7e-06 |
Identity: 33.75% |
Span: 228bp (27.0%) |
Frame: -1 |
| At2g28290.2 68409.m05669 SNF2 domain/helicase domain-containing protein similar to transcriptional activator HBRM [Ho... |
| Match: At2g28290.1 |
score: 49.29 |
e-value: 2.7e-06 |
Identity: 33.75% |
Span: 228bp (27.0%) |
Frame: -1 |
| At2g28290.1 68409.m05668 SNF2 domain/helicase domain-containing protein similar to transcriptional activator HBRM [Ho... |
| Match: At3g54460.1 |
score: 49.29 |
e-value: 2.7e-06 |
Identity: 32.91% |
Span: 228bp (27.0%) |
Frame: -1 |
| At3g54460.1 68410.m05573 SNF2 domain/helicase domain/F-box domain-containing protein similar to SP|P36607 DNA repair ... |
| Match: At3g06400.1 |
score: 49.29 |
e-value: 2.7e-06 |
Identity: 34.78% |
Span: 207bp (24.6%) |
Frame: -1 |
| At3g06400.1 68410.m00674 DNA-dependent ATPase, putative similar to DNA-dependent ATPase SNF2H [Mus musculus] GI:14028... |
| Match: At1g08600.1 |
score: 48.52 |
e-value: 4.6e-06 |
Identity: 33.33% |
Span: 243bp (28.8%) |
Frame: -1 |
| At1g08600.1 68408.m00860 SNF2domain/helicase domain-containing protein similar to SP|P46100 Transcriptional regulator... |
| Match: At4g31900.1 |
score: 48.52 |
e-value: 4.6e-06 |
Identity: 43.14% |
Span: 153bp (18.1%) |
Frame: -1 |
| At4g31900.1 68411.m04127 chromatin remodeling factor, putative strong similarity to chromatin remodeling factor CHD3 ... |
| Match: At5g18620.2 |
score: 48.14 |
e-value: 6.1e-06 |
Identity: 34.78% |
Span: 207bp (24.6%) |
Frame: -1 |
| At5g18620.2 68412.m07827 DNA-dependent ATPase, putative similar to DNA-dependent ATPase SNF2H [Mus musculus] GI:14028... |
| Match: At1g05480.1 |
score: 48.14 |
e-value: 6.1e-06 |
Identity: 41.25% |
Span: 189bp (22.4%) |
Frame: -1 |
| At1g05480.1 68408.m00506 SNF2domain/helicase domain-containing protein low similarity to SP|Q9U7E0 Transcriptional re... |
| Match: At5g18620.1 |
score: 48.14 |
e-value: 6.1e-06 |
Identity: 34.78% |
Span: 207bp (24.6%) |
Frame: -1 |
| At5g18620.1 68412.m07826 DNA-dependent ATPase, putative similar to DNA-dependent ATPase SNF2H [Mus musculus] GI:14028... |
| Match: At2g13370.1 |
score: 47.37 |
e-value: 1e-05 |
Identity: 43.64% |
Span: 165bp (19.6%) |
Frame: -1 |
| At2g13370.1 68409.m01336 chromodomain-helicase-DNA-binding (CHD) protein family similar to SP|O14647 Chromodomain-hel... |
| Match: At2g18760.1 |
score: 45.82 |
e-value: 3e-05 |
Identity: 45.45% |
Span: 132bp (15.7%) |
Frame: -1 |
| At2g18760.1 68409.m01975 SNF2domain/helicase domain-containing protein similar to SP|Q03468 Excision repair protein E... |
| Match: At3g06010.1 |
score: 45.82 |
e-value: 3e-05 |
Identity: 37.33% |
Span: 225bp (26.7%) |
Frame: -1 |
| At3g06010.1 68410.m00627 homeotic gene regulator, putative similar to SP|P25439 Homeotic gene regulator (Brahma prote... |
| Match: At3g54280.1 |
score: 45.44 |
e-value: 3.9e-05 |
Identity: 35.8% |
Span: 210bp (24.9%) |
Frame: -1 |
| At3g54280.1 68410.m05549 SNF2domain/helicase domain-containing protein similar to SP|O14981 TBP-associated factor 172... |
| Match: At2g44980.1 |
score: 45.05 |
e-value: 5.1e-05 |
Identity: 33.87% |
Span: 186bp (22.1%) |
Frame: -1 |
| At2g44980.1 68409.m05060 transcription regulatory protein SNF2, putative similar to SNF2P [Oryza sativa (japonica cul... |
| Match: At5g19310.1 |
score: 44.67 |
e-value: 6.7e-05 |
Identity: 34.67% |
Span: 225bp (26.7%) |
Frame: -1 |
| At5g19310.1 68412.m02106 homeotic gene regulator, putative similar to SP|P25439 Homeotic gene regulator (Brahma prote... |
| Match: At1g48310.1 |
score: 42.36 |
e-value: 0.00033 |
Identity: 45.1% |
Span: 153bp (18.1%) |
Frame: -1 |
| At1g48310.1 68408.m04945 SNF2domain/helicase domain-containing protein contains similarity to DNA-dependent ATPase A ... |
| Match: At1g03750.1 |
score: 39.66 |
e-value: 0.002 |
Identity: 37.04% |
Span: 162bp (19.2%) |
Frame: -1 |
| At1g03750.1 68408.m00319 helicase, putative similar to SP|Q03468 Excision repair protein ERCC-6 (Cockayne syndrome pr... |
| Match: At2g21450.1 |
score: 39.28 |
e-value: 0.003 |
Identity: 36.36% |
Span: 198bp (23.5%) |
Frame: -1 |
| At2g21450.1 68409.m02311 SNF2domain/helicase domain-containing protein low similarity to SP|Q61687 Transcriptional re... |
| Match: At5g20420.1 |
score: 38.12 |
e-value: 0.006 |
Identity: 45.24% |
Span: 126bp (14.9%) |
Frame: -1 |
| At5g20420.1 68412.m02225 SNF2domain/helicase domain-containing protein low similarity to SP|Q9U7E0 Transcriptional re... |
| Match: At3g42670.1 |
score: 38.12 |
e-value: 0.006 |
Identity: 45.24% |
Span: 126bp (14.9%) |
Frame: -1 |
| At3g42670.1 68410.m04115 SNF2domain/helicase domain-containing protein low similarity to SP|P41410 DNA repair protein... |
| Match: At2g46020.1 |
score: 37.74 |
e-value: 0.008 |
Identity: 42.59% |
Span: 162bp (19.2%) |
Frame: -1 |
| At2g46020.1 68409.m05175 transcription regulatory protein SNF2, putative similar to SP|P22082 Transcription regulator... |
| Match: At3g19210.1 |
score: 36.19 |
e-value: 0.024 |
Identity: 35.29% |
Span: 153bp (18.1%) |
Frame: -1 |
| At3g19210.1 68410.m02201 DNA repair protein RAD54, putative similar to RAD54 GB:CAA71278 from [Drosophila melanogaste... |
| Match: At5g07810.1 |
score: 35.42 |
e-value: 0.041 |
Identity: 38.6% |
Span: 171bp (20.3%) |
Frame: -1 |
| At5g07810.1 68412.m00829 SNF2 domain/helicase domain-containing protein similar to HepA-related protein HARP [Homo sa... |
|
