| genbank/nr [blastx] | Showing best 61 hits recorded |
| Match: gi|42562770|ref|NP_175983.2| |
score: 212.6 |
e-value: 5e-109 |
Identity: 71.76% |
Span: 393bp (32.4%) |
Frame: 1 |
| gi|42562770|ref|NP_175983.2| CAF1 family ribonuclease [Arabidopsis thaliana] |
| Match: gi|8778305|gb|AAF79314.1| |
score: 201.8 |
e-value: 2e-50 |
Identity: 58.19% |
Span: 531bp (43.8%) |
Frame: 1 |
| gi|8778305|gb|AAF79314.1| F14J16.11 [Arabidopsis thaliana] |
| Match: gi|42562770|ref|NP_175983.2| |
score: 184.9 |
e-value: 5e-109 |
Identity: 58.55% |
Span: 456bp (37.6%) |
Frame: 2 |
| gi|42562770|ref|NP_175983.2| CAF1 family ribonuclease [Arabidopsis thaliana] |
| Match: gi|8778305|gb|AAF79314.1| |
score: 184.9 |
e-value: 1.6e-51 |
Identity: 58.55% |
Span: 456bp (37.6%) |
Frame: 2 |
| gi|8778305|gb|AAF79314.1| F14J16.11 [Arabidopsis thaliana] |
| Match: gi|38606521|emb|CAE05998.3| |
score: 167.5 |
e-value: 6.3e-47 |
Identity: 52.7% |
Span: 444bp (36.6%) |
Frame: 2 |
| gi|38606521|emb|CAE05998.3| OSJNBa0016O02.8 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|38606521|emb|CAE05998.3| |
score: 115.5 |
e-value: 1.9e-24 |
Identity: 58.14% |
Span: 258bp (21.3%) |
Frame: 1 |
| gi|38606521|emb|CAE05998.3| OSJNBa0016O02.8 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|15230837|ref|NP_189170.1| |
score: 104 |
e-value: 5.8e-21 |
Identity: 38.17% |
Span: 393bp (32.4%) |
Frame: 1 |
| CAF1 family ribonuclease [Arabidopsis thaliana] >gi75162449|sp|Q8W4C3.1|PARNL_ARATH RecName: Full=Poly(A)-specific ri... |
| Match: gi|9279724|dbj|BAB01314.1| |
score: 104 |
e-value: 5.8e-21 |
Identity: 38.17% |
Span: 393bp (32.4%) |
Frame: 1 |
| unnamed protein product [Arabidopsis thaliana] |
| Match: gi|41055217|ref|NP_957382.1| |
score: 92.05 |
e-value: 2.3e-17 |
Identity: 37.21% |
Span: 375bp (30.9%) |
Frame: 1 |
| gi|41055217|ref|NP_957382.1| similar to poly(A)-specific ribonuclease (deadenylation nuclease) [Danio rerio] gi|29791... |
| Match: gi|37681897|gb|AAQ97826.1| |
score: 92.05 |
e-value: 2.3e-17 |
Identity: 37.21% |
Span: 375bp (30.9%) |
Frame: 1 |
| gi|37681897|gb|AAQ97826.1| poly(A)-specific ribonuclease [Danio rerio] |
| Match: gi|49115955|gb|AAH73682.1| |
score: 88.58 |
e-value: 2.5e-16 |
Identity: 33.86% |
Span: 375bp (30.9%) |
Frame: 1 |
| gi|49115955|gb|AAH73682.1| Unknown (protein for IMAGE:5572400) [Xenopus laevis] |
| Match: gi|14495249|gb|AAK64218.1| |
score: 88.58 |
e-value: 2.5e-16 |
Identity: 33.86% |
Span: 375bp (30.9%) |
Frame: 1 |
| gi|14495249|gb|AAK64218.1| poly(A)-specific ribonuclease [Xenopus laevis] |
| Match: gi|46329632|gb|AAH68919.1| |
score: 88.58 |
e-value: 2.5e-16 |
Identity: 33.86% |
Span: 375bp (30.9%) |
Frame: 1 |
| gi|46329632|gb|AAH68919.1| Parn-A protein [Xenopus laevis] |
| Match: gi|47218930|emb|CAF98128.1| |
score: 87.43 |
e-value: 5.6e-16 |
Identity: 35.83% |
Span: 354bp (29.2%) |
Frame: 1 |
| gi|47218930|emb|CAF98128.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|4505611|ref|NP_002573.1| |
score: 84.34 |
e-value: 4.8e-15 |
Identity: 34.65% |
Span: 375bp (30.9%) |
Frame: 1 |
| gi|4505611|ref|NP_002573.1| poly(A)-specific ribonuclease (deadenylation nuclease); deadenylation nuclease [Homo sapi... |
| Match: gi|15230837|ref|NP_189170.1| |
score: 82.8 |
e-value: 1.4e-14 |
Identity: 35.29% |
Span: 405bp (33.4%) |
Frame: 2 |
| CAF1 family ribonuclease [Arabidopsis thaliana] >gi75162449|sp|Q8W4C3.1|PARNL_ARATH RecName: Full=Poly(A)-specific ri... |
| Match: gi|9279724|dbj|BAB01314.1| |
score: 82.8 |
e-value: 1.4e-14 |
Identity: 35.29% |
Span: 405bp (33.4%) |
Frame: 2 |
| unnamed protein product [Arabidopsis thaliana] |
| Match: gi|20891791|ref|XP_148364.1| |
score: 80.49 |
e-value: 6.9e-14 |
Identity: 33.33% |
Span: 363bp (29.9%) |
Frame: 1 |
| gi|20891791|ref|XP_148364.1| poly(A)-specific ribonuclease (deadenylation nuclease) [Mus musculus] gi|21311877|ref|NP... |
| Match: gi|34868070|ref|XP_340741.1| |
score: 80.49 |
e-value: 6.9e-14 |
Identity: 33.33% |
Span: 363bp (29.9%) |
Frame: 1 |
| gi|34868070|ref|XP_340741.1| similar to poly(A)-specific ribonuclease (deadenylation nuclease) [Rattus norvegicus] |
| Match: gi|18256918|gb|AAH21899.1| |
score: 80.11 |
e-value: 9e-14 |
Identity: 33.33% |
Span: 363bp (29.9%) |
Frame: 1 |
| gi|18256918|gb|AAH21899.1| Parn protein [Mus musculus] |
| Match: gi|48097666|ref|XP_393852.1| |
score: 75.1 |
e-value: 2.9e-12 |
Identity: 31.45% |
Span: 372bp (30.7%) |
Frame: 1 |
| gi|48097666|ref|XP_393852.1| similar to poly(A)-specific ribonuclease [Apis mellifera] |
| Match: gi|21751916|dbj|BAC04070.1| |
score: 66.63 |
e-value: 1e-09 |
Identity: 32.88% |
Span: 402bp (33.1%) |
Frame: 1 |
| gi|21751916|dbj|BAC04070.1| unnamed protein product [Homo sapiens] |
| Match: gi|34853777|ref|XP_341757.1| |
score: 65.85 |
e-value: 1.8e-09 |
Identity: 32.19% |
Span: 402bp (33.1%) |
Frame: 1 |
| gi|34853777|ref|XP_341757.1| similar to hypothetical protein FLJ40240 [Rattus norvegicus] |
| Match: gi|38081701|ref|XP_139740.3| |
score: 65.47 |
e-value: 2.3e-09 |
Identity: 32.19% |
Span: 402bp (33.1%) |
Frame: 1 |
| gi|38081701|ref|XP_139740.3| similar to hypothetical protein FLJ40240 [Mus musculus] |
| Match: gi|41055217|ref|NP_957382.1| |
score: 65.08 |
e-value: 3e-09 |
Identity: 30.58% |
Span: 363bp (29.9%) |
Frame: 2 |
| gi|41055217|ref|NP_957382.1| similar to poly(A)-specific ribonuclease (deadenylation nuclease) [Danio rerio] gi|29791... |
| Match: gi|31198971|ref|XP_308433.1| |
score: 64.7 |
e-value: 3.9e-09 |
Identity: 31.58% |
Span: 369bp (30.4%) |
Frame: 1 |
| gi|31198971|ref|XP_308433.1| ENSANGP00000018368 [Anopheles gambiae] gi|30178688|gb|EAA04629.2| ENSANGP00000018368 [An... |
| Match: gi|37681897|gb|AAQ97826.1| |
score: 64.31 |
e-value: 5.1e-09 |
Identity: 37.65% |
Span: 255bp (21.0%) |
Frame: 2 |
| gi|37681897|gb|AAQ97826.1| poly(A)-specific ribonuclease [Danio rerio] |
| Match: gi|14388565|dbj|BAB60801.1| |
score: 63.93 |
e-value: 6.7e-09 |
Identity: 32.14% |
Span: 384bp (31.7%) |
Frame: 1 |
| gi|14388565|dbj|BAB60801.1| hypothetical protein [Macaca fascicularis] |
| Match: gi|47218930|emb|CAF98128.1| |
score: 63.54 |
e-value: 8.7e-09 |
Identity: 29.45% |
Span: 438bp (36.1%) |
Frame: 2 |
| gi|47218930|emb|CAF98128.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|14495249|gb|AAK64218.1| |
score: 60.08 |
e-value: 9.6e-08 |
Identity: 30.69% |
Span: 303bp (25.0%) |
Frame: 2 |
| gi|14495249|gb|AAK64218.1| poly(A)-specific ribonuclease [Xenopus laevis] |
| Match: gi|23509635|ref|NP_702302.1| |
score: 60.08 |
e-value: 9.6e-08 |
Identity: 30.7% |
Span: 342bp (28.2%) |
Frame: 2 |
| gi|23509635|ref|NP_702302.1| hypothetical protein [Plasmodium falciparum 3D7] gi|23497484|gb|AAN37026.1| hypothetical... |
| Match: gi|49115955|gb|AAH73682.1| |
score: 60.08 |
e-value: 9.6e-08 |
Identity: 30.69% |
Span: 303bp (25.0%) |
Frame: 2 |
| gi|49115955|gb|AAH73682.1| Unknown (protein for IMAGE:5572400) [Xenopus laevis] |
| Match: gi|46329632|gb|AAH68919.1| |
score: 60.08 |
e-value: 9.6e-08 |
Identity: 30.69% |
Span: 303bp (25.0%) |
Frame: 2 |
| gi|46329632|gb|AAH68919.1| Parn-A protein [Xenopus laevis] |
| Match: gi|48094687|ref|XP_392167.1| |
score: 59.31 |
e-value: 1.6e-07 |
Identity: 37.5% |
Span: 216bp (17.8%) |
Frame: 2 |
| gi|48094687|ref|XP_392167.1| similar to poly(A)-specific ribonuclease [Apis mellifera] |
| Match: gi|23488425|gb|EAA21313.1| |
score: 59.31 |
e-value: 1.6e-07 |
Identity: 29.82% |
Span: 342bp (28.2%) |
Frame: 2 |
| gi|23488425|gb|EAA21313.1| hypothetical protein [Plasmodium yoelii yoelii] |
| Match: gi|20891791|ref|XP_148364.1| |
score: 58.15 |
e-value: 3.7e-07 |
Identity: 32.26% |
Span: 255bp (21.0%) |
Frame: 2 |
| gi|20891791|ref|XP_148364.1| poly(A)-specific ribonuclease (deadenylation nuclease) [Mus musculus] gi|21311877|ref|NP... |
| Match: gi|18256918|gb|AAH21899.1| |
score: 58.15 |
e-value: 3.7e-07 |
Identity: 32.26% |
Span: 255bp (21.0%) |
Frame: 2 |
| gi|18256918|gb|AAH21899.1| Parn protein [Mus musculus] |
| Match: gi|4505611|ref|NP_002573.1| |
score: 57.77 |
e-value: 4.8e-07 |
Identity: 31.18% |
Span: 255bp (21.0%) |
Frame: 2 |
| gi|4505611|ref|NP_002573.1| poly(A)-specific ribonuclease (deadenylation nuclease); deadenylation nuclease [Homo sapi... |
| Match: gi|27735155|ref|NP_775787.1| |
score: 55.84 |
e-value: 1.8e-06 |
Identity: 37.7% |
Span: 183bp (15.1%) |
Frame: 2 |
| gi|27735155|ref|NP_775787.1| hypothetical protein FLJ40240 [Homo sapiens] gi|21757367|dbj|BAC05101.1| unnamed protein... |
| Match: gi|21751916|dbj|BAC04070.1| |
score: 55.84 |
e-value: 1.8e-06 |
Identity: 37.7% |
Span: 183bp (15.1%) |
Frame: 2 |
| gi|21751916|dbj|BAC04070.1| unnamed protein product [Homo sapiens] |
| Match: gi|38081701|ref|XP_139740.3| |
score: 55.84 |
e-value: 1.8e-06 |
Identity: 37.7% |
Span: 183bp (15.1%) |
Frame: 2 |
| gi|38081701|ref|XP_139740.3| similar to hypothetical protein FLJ40240 [Mus musculus] |
| Match: gi|17562460|ref|NP_506169.1| |
score: 55.07 |
e-value: 3.1e-06 |
Identity: 36.14% |
Span: 249bp (20.5%) |
Frame: 2 |
| gi|17562460|ref|NP_506169.1| poly-specific ribonuclease (5N170) [Caenorhabditis elegans] gi|7505706|pir||T23559 hypot... |
| Match: gi|27735155|ref|NP_775787.1| |
score: 55.07 |
e-value: 3.1e-06 |
Identity: 32.58% |
Span: 360bp (29.7%) |
Frame: 1 |
| gi|27735155|ref|NP_775787.1| hypothetical protein FLJ40240 [Homo sapiens] gi|21757367|dbj|BAC05101.1| unnamed protein... |
| Match: gi|34853777|ref|XP_341757.1| |
score: 54.68 |
e-value: 4e-06 |
Identity: 37.7% |
Span: 183bp (15.1%) |
Frame: 2 |
| gi|34853777|ref|XP_341757.1| similar to hypothetical protein FLJ40240 [Rattus norvegicus] |
| Match: gi|39583877|emb|CAE63967.1| |
score: 54.3 |
e-value: 5.3e-06 |
Identity: 36.99% |
Span: 216bp (17.8%) |
Frame: 2 |
| gi|39583877|emb|CAE63967.1| Hypothetical protein CBG08556 [Caenorhabditis briggsae] |
| Match: gi|31198971|ref|XP_308433.1| |
score: 53.14 |
e-value: 1.2e-05 |
Identity: 36.92% |
Span: 195bp (16.1%) |
Frame: 2 |
| gi|31198971|ref|XP_308433.1| ENSANGP00000018368 [Anopheles gambiae] gi|30178688|gb|EAA04629.2| ENSANGP00000018368 [An... |
| Match: gi|34868070|ref|XP_340741.1| |
score: 47.75 |
e-value: 0.00049 |
Identity: 38.6% |
Span: 171bp (14.1%) |
Frame: 2 |
| gi|34868070|ref|XP_340741.1| similar to poly(A)-specific ribonuclease (deadenylation nuclease) [Rattus norvegicus] |
| Match: gi|48097666|ref|XP_393852.1| |
score: 47.37 |
e-value: 0.00064 |
Identity: 36.49% |
Span: 222bp (18.3%) |
Frame: 2 |
| gi|48097666|ref|XP_393852.1| similar to poly(A)-specific ribonuclease [Apis mellifera] |
| Match: gi|38106132|gb|EAA52480.1| |
score: 46.59 |
e-value: 0.001 |
Identity: 38.3% |
Span: 141bp (11.6%) |
Frame: 2 |
| gi|38106132|gb|EAA52480.1| hypothetical protein MG05172.4 [Magnaporthe grisea 70-15] |
| Match: gi|19112846|ref|NP_596054.1| |
score: 46.21 |
e-value: 0.001 |
Identity: 32.31% |
Span: 195bp (16.1%) |
Frame: 2 |
| gi|19112846|ref|NP_596054.1| hypothetical protein [Schizosaccharomyces pombe] gi|7491557|pir||T40064 hypothetical pro... |
| Match: gi|39591428|emb|CAE73482.1| |
score: 45.82 |
e-value: 0.002 |
Identity: 22.66% |
Span: 384bp (31.7%) |
Frame: 1 |
| gi|39591428|emb|CAE73482.1| Hypothetical protein CBG20934 [Caenorhabditis briggsae] |
| Match: gi|17537615|ref|NP_496602.1| |
score: 45.44 |
e-value: 0.002 |
Identity: 24% |
Span: 375bp (30.9%) |
Frame: 1 |
| gi|17537615|ref|NP_496602.1| target of EGR1 member 1 (55.9 kD) (2M542) [Caenorhabditis elegans] gi|7510250|pir||T3164... |
| Match: gi|38606521|emb|CAE05998.3| |
score: 44.28 |
e-value: 6.3e-47 |
Identity: 40.35% |
Span: 171bp (14.1%) |
Frame: 3 |
| gi|38606521|emb|CAE05998.3| OSJNBa0016O02.8 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|32414731|ref|XP_327845.1| |
score: 43.9 |
e-value: 0.007 |
Identity: 37.5% |
Span: 144bp (11.9%) |
Frame: 2 |
| gi|32414731|ref|XP_327845.1| predicted protein [Neurospora crassa] gi|28919979|gb|EAA29368.1| predicted protein [Neur... |
| Match: gi|17562460|ref|NP_506169.1| |
score: 43.51 |
e-value: 0.009 |
Identity: 29.71% |
Span: 390bp (32.2%) |
Frame: 1 |
| gi|17562460|ref|NP_506169.1| poly-specific ribonuclease (5N170) [Caenorhabditis elegans] gi|7505706|pir||T23559 hypot... |
| Match: gi|42562770|ref|NP_175983.2| |
score: 43.51 |
e-value: 5e-109 |
Identity: 39.66% |
Span: 174bp (14.3%) |
Frame: 3 |
| gi|42562770|ref|NP_175983.2| CAF1 family ribonuclease [Arabidopsis thaliana] |
| Match: gi|8778305|gb|AAF79314.1| |
score: 42.36 |
e-value: 1.6e-51 |
Identity: 36.51% |
Span: 189bp (15.6%) |
Frame: 3 |
| gi|8778305|gb|AAF79314.1| F14J16.11 [Arabidopsis thaliana] |
| Match: gi|38106132|gb|EAA52480.1| |
score: 41.97 |
e-value: 0.027 |
Identity: 25.77% |
Span: 279bp (23.0%) |
Frame: 1 |
| gi|38106132|gb|EAA52480.1| hypothetical protein MG05172.4 [Magnaporthe grisea 70-15] |
| Match: gi|28829814|gb|AAO52316.1| |
score: 41.59 |
e-value: 0.035 |
Identity: 32.14% |
Span: 168bp (13.8%) |
Frame: 2 |
| gi|28829814|gb|AAO52316.1| similar to Homo sapiens (Human). Hypothetical protein FLJ13949 [Dictyostelium discoideum] |
| Match: gi|18605651|gb|AAH23109.1| |
score: 40.43 |
e-value: 0.079 |
Identity: 26.19% |
Span: 372bp (30.7%) |
Frame: 1 |
| gi|18605651|gb|AAH23109.1| RIKEN cDNA 4930584N22 [Mus musculus] |
| Match: gi|26340558|dbj|BAC33941.1| |
score: 40.43 |
e-value: 0.079 |
Identity: 48.65% |
Span: 111bp (9.2%) |
Frame: 1 |
| gi|26340558|dbj|BAC33941.1| unnamed protein product [Mus musculus] |
|
